RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 FBXO8Q9NRD0 319 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 COQ4Q9Y3A0 265 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 DVL2O14641 736 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 TAS2R46P59540 309 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 SCLYQ96I15 445 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 SLCO5A1Q9H2Y9 848 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 DNMT3AQ9Y6K1 912 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 DISP2A7MBM2 1401 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 A6NLC8 198 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 TRHRP34981 398 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 CTSOP43234 321 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 SMAD3P84022 425 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 LARP4Q71RC2 724 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 RBMXL3Q8N7X1 1067 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 OR5M3Q8NGP4 307 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 OR6K2Q8NGY2 324 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 OR5AK3PQ8NH89 298 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 WRAP53Q9BUR4 548 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 GBA2Q9HCG7 927 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 CRHR2Q13324 411 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 MAMDC4Q6UXC1 1216 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 RNF130Q86XS8 419 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 C2orf42Q9NWW7 574 aa10.62□□□□□ -0.71
HDGFL3-201ENST00000299633 SPATA31C2B4DYI2 1134 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ZNF701M0R085 212 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NDUFS4O43181 175 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 LYPLA2O95372 231 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SERPINA9Q86WD7 417 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ABHD16BQ9H3Z7 469 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 UBTD1Q9HAC8 227 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 PHYHO14832 338 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SURF4O15260 269 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 MAFO75444 373 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 BCHEP06276 602 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ALPIP09923 528 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 OR10J4P0C629 311 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 MEOX1P50221 254 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SGSHP51688 502 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ZNF154Q13106 437 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ARL6IP1Q15041 203 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 LATO43561 262 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ITGB2P05107 769 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 CSNK2A2P19784 350 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NME2P22392 152 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 DLX5P56178 289 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 TAS2R19P59542 299 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 EIF4HQ15056 248 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 DACT2Q5SW24 774 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 PRR18Q8N4B5 295 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 OR4M1Q8NGD0 313 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 RHEBL1Q8TAI7 183 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 POLDIP3Q9BY77 421 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ERVMER34-1Q9H9K5 563 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 CPQQ9Y646 472 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SULF2Q8IWU5 870 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NANOS1Q8WY41 292 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SGTBQ96EQ0 304 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 FAM46AQ96IP4 442 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 DHRS9Q9BPW9 319 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 AKIRIN1Q9H9L7 192 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SULT1A3P0DMM9 295 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SULT1A4P0DMN0 295 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 PYCR1P32322 319 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 CXCL9Q07325 125 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 RAB32Q13637 225 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 BPIFCQ8NFQ6 507 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 RNF141Q8WVD5 230 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 LMF1Q96S06 567 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ARHGDIGQ99819 225 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 BET1LQ9NYM9 111 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SOCS2O14508 198 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NDUFV2P19404 249 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 GAS6Q14393 721 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 UBXN2BQ14CS0 331 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 C9orf131Q5VYM1 1079 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NUDT13Q86X67 352 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 RBP7Q96R05 134 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 CEPT1Q9Y6K0 416 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ITGB4P16144 1822 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 FAAHO00519 579 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 SIX6O95475 246 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 TPPP2P59282 170 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 IL20RBQ6UXL0 311 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 TMPPEQ6ZT21 453 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NRSN1Q8IZ57 195 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 OR51G2Q8NGK0 314 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 OR6N1Q8NGY5 312 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NRG4Q8WWG1 115 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 LRIG1Q96JA1 1093 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 HHIPL1Q96JK4 782 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 PITX2Q99697 317 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 FAM118AQ9NWS6 357 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 NFS1Q9Y697 457 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ESR1P03372 595 aa10.61□□□□□ -0.71
HDGFL3-201ENST00000299633 ADH5P11766 374 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms