RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 NR4A3Q92570 626 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 RFKQ969G6 155 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 MS4A4EQ96PG1 132 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 DEPDC7Q96QD5 511 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TRIM45Q9H8W5 580 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 LYARQ9NX58 379 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 ZNF624Q9P2J8 865 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TNFRSF10DQ9UBN6 386 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 KLF15Q9UIH9 416 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 KCNE5Q9UJ90 142 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CDH10Q9Y6N8 788 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3DA0A087WVF3 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3EA0A087X179 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3KA0A087X1G2 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 XIRP2A4UGR9 3374 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3FA6NER0 549 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CENPXA8MT69 81 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3LB9A6J9 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 H0Y8X5 98 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 J3QRE1 110 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CTSVO60911 334 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 OR5F1O95221 314 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 APODP05090 189 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3HP0C7X1 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 SLC2A2P11168 524 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 NDUFV2P19404 249 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBXA2RP21731 343 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TSFMP43897 325 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 EVX1P49640 407 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 ARFIP1P53367 373 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CTBP2P56545 445 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 MRPS15P82914 257 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CD83Q01151 205 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TNFRSF17Q02223 184 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 Q5BKY6 102 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3GQ6DHY5 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 CXXC5Q7LFL8 322 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 ASPGQ86U10 573 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 PEX5LQ8IYB4 626 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 GJD3Q8N144 294 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 OR2T33Q8NG76 320 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 KIAA1143Q96AT1 154 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 SDF2Q99470 211 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 PPIL3Q9H2H8 161 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 MTHFD2LQ9H903 347 aaPredicted RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 RMI1Q9H9A7 625 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
BCCIP-202ENST00000299130 MRPS2Q9Y399 296 aaKnown RBP12.68□□□□□ -0.38
BCCIP-202ENST00000299130 PRSS38A1L453 326 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 K7EQS6 105 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 PEX12O00623 359 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 PLRG1O43660 514 aaKnown RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 AKAP8O43823 692 aaKnown RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 IFNA8P32881 189 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 CSTF1Q05048 431 aaKnown RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 IL18Q14116 193 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ARHGAP11BQ3KRB8 267 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 PRSS41Q7RTY9 318 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 FLVCR1-AS1Q8TAF5 88 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 YIPF2Q9BWQ6 316 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR52D1Q9H346 318 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 PAQR5Q9NXK6 330 aaPredicted RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 RWDD3Q9Y3V2 267 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 NOX1Q9Y5S8 564 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 LOC105369274A0A096LPK9 316 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 LOC102723532A0A0G2JNH3 316 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 C12orf71A8MTZ7 269 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 HLA-DPB1P04440 258 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ADPRHP54922 357 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ACSM1Q08AH1 577 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 CDK10Q15131 360 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 FCRLBQ6BAA4 426 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR4N4Q8N0Y3 316 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR4K14Q8NGD5 310 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OR52N1Q8NH53 320 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 ENKURQ8TC29 256 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 OBP2AQ9NY56 170 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms