RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DUSP6Q16828 381 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 OSTF1Q92882 214 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 OR51V1Q9H2C8 321 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 UBQLN3Q9H347 655 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 MCUBQ9NWR8 336 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 KLHL28Q9NXS3 571 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 EXTL2Q9UBQ6 330 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 F5P12259 2224 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 CEACAM5P06731 702 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 AGFG1P52594 562 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 RPS7P62081 194 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 GALK2Q01415 458 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 RPTNQ6XPR3 784 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF836Q6ZNA1 936 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 CXXC5Q7LFL8 322 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 OR2L8Q8NGY9 312 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 RFKQ969G6 155 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 ASB16Q96NS5 453 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 RBFOX1Q9NWB1 397 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 CA5BQ9Y2D0 317 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 A0A1W2PPK0 400 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 SCO2O43819 266 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 HNRNPA1P09651 372 aaKnown RBP eCLIP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 AK4P27144 223 aaPredicted RBP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 DEFB134Q4QY38 66 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 TRMT12Q53H54 448 aaKnown RBP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 TANGO2Q6ICL3 276 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 ARL9Q6T311 187 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 OR2T33Q8NG76 320 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 OR10H4Q8NGA5 316 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF764Q96H86 408 aaPredicted RBP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 FBXL4Q9UKA2 621 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 WDR45Q9Y484 360 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 MAGEB4O15481 346 aaPredicted RBP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 NDUFB5O43674 189 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 FPR3P25089 353 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 DUSP5Q16690 384 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 C2orf27AQ580R0 203 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 MTSS1LQ765P7 747 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 SFXN5Q8TD22 340 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 ACTRT3Q9BYD9 372 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 ADAP2Q9NPF8 381 aa22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF443Q9Y2A4 671 aaPredicted RBP22.73■■□□□ 1.23
SPTSSA-201ENST00000298130 PLOD3O60568 738 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 GYPBP06028 91 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 CYB561A3Q8NBI2 242 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 TMEM43Q9BTV4 400 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 BTBD1Q9H0C5 482 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 C11orf49Q9H6J7 331 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 TMA7Q9Y2S6 64 aaKnown RBP22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 STON1Q9Y6Q2 735 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 SEC14L5O43304 696 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 KAT7O95251 611 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 PRKAR1AP10644 381 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 NDUFV2P19404 249 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 MAKP20794 623 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 IFNA8P32881 189 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 EVI2BP34910 448 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 FXYD6P3P58550 94 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 DNAJC5GQ8N7S2 189 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 TTLQ8NG68 377 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 OR14C36Q8NHC7 312 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 SOSTQ9BQB4 213 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 OR52D1Q9H346 318 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 IL23AQ9NPF7 189 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 GTPBP1O00178 669 aaKnown RBP22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 PEX12O00623 359 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 ATXN8OSP0DMR3 200 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 TFPIP10646 304 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 PRKCAP17252 672 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 HTR1FP30939 366 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 SLC3A1Q07837 685 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 RPE65Q16518 533 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 MBOAT2Q6ZWT7 520 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 SYT9Q86SS6 491 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 GALNT6Q8NCL4 622 aa22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 PHPT1Q9NRX4 125 aaPredicted RBP22.72■■□□□ 1.23
SPTSSA-201ENST00000298130 SYT5O00445 386 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 PAICSP22234 425 aaKnown RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 GJA4P35212 333 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 MLLT3P42568 568 aaPredicted RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 YIF1BQ5BJH7 314 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 C1orf53Q5VUE5 145 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 MFSD12Q6NUT3 480 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 VN1R4Q7Z5H5 301 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 CCL4L1Q8NHW4 92 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 DNAJA4Q8WW22 397 aaPredicted RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 RAB7BQ96AH8 199 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 ALG8Q9BVK2 526 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 PITHD1Q9GZP4 211 aaPredicted RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 IRGMA1A4Y4 181 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 PRICKLE3O43900 615 aaPredicted RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 CPN2P22792 545 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 STAT5AP42229 794 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 SRP9P49458 86 aaKnown RBP22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 E2F1Q01094 437 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 PDGFRLQ15198 375 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 BMPERQ8N8U9 685 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 OR13C5Q8NGS8 318 aa22.71■■□□□ 1.23
SPTSSA-201ENST00000298130 THAP10Q9P2Z0 257 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms