RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FUT7Q11130 342 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 GINS1Q14691 196 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 TIGD6Q17RP2 521 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 TCEANCQ8N8B7 351 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 OR51Q1Q8NH59 317 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 PELOQ9BRX2 385 aaKnown RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 TEX12Q9BXU0 123 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 PRRG3Q9BZD7 231 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 FSCN3Q9NQT6 498 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 RPL36Q9Y3U8 105 aaKnown RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 MMACHCQ9Y4U1 282 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 A0A1W2PQM1 296 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 ENTPD6O75354 484 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 OR2B3O76000 313 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 ZNF883P0CG24 379 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 PIPP12273 146 aaPredicted RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 PCYT1AP49585 367 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDPN-201ENST00000294489 DSG2Q14126 1118 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 MAPK14Q16539 360 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 TMEM201Q5SNT2 666 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 MRPL2Q5T653 305 aaKnown RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 MEDAGQ5VYS4 303 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 GDF7Q7Z4P5 450 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 NAT6Q93015 286 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 CDCA4Q9BXL8 241 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 POLDIP3Q9BY77 421 aaKnown RBP8.48□□□□□ -1.05
PDPN-201ENST00000294489 EVA1AQ9H8M9 152 aa8.48□□□□□ -1.05
PDPN-201ENST00000294489 M0R3G1 203 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 RFX3P48380 749 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 EMDP50402 254 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CCL7P80098 99 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 AQP6Q13520 282 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SERTAD2Q14140 314 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SPCS2Q15005 226 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SYT16Q17RD7 645 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 AMZ1Q400G9 498 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FLYWCH1Q4VC44 716 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 PLAG1Q6DJT9 500 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SLC27A4Q6P1M0 643 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 QSOX2Q6ZRP7 698 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 RASSF6Q6ZTQ3 369 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 MBOAT2Q6ZWT7 520 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 IQCF1Q8N6M8 205 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
PDPN-201ENST00000294489 LOXL4Q96JB6 756 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 GPA33Q99795 319 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 LRRN3Q9H3W5 708 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FOLH1BQ9HBA9 442 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SLC25A19Q9HC21 320 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 DNAJC27Q9NZQ0 273 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 GMEB2Q9UKD1 530 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 PCDHGB2Q9Y5G2 931 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FER1L5A0AVI2 2057 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 GXYLT2A0PJZ3 443 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 TRAPPC13A5PLN9 417 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CDHR4A6H8M9 788 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 PEX12O00623 359 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 TLX2O43763 284 aaPredicted RBP8.47□□□□□ -1.05
PDPN-201ENST00000294489 PRAMEF2O60811 474 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 KCNK2O95069 426 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FPR3P25089 353 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 RORAP35398 523 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 STAT5AP42229 794 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 OMPP47874 163 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 BTG2P78543 158 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CDK5Q00535 292 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 OCA2Q04671 838 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 ERV3-1Q14264 604 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 ZNF267Q14586 743 aaPredicted RBP8.47□□□□□ -1.05
PDPN-201ENST00000294489 SNAPC1Q16533 368 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 OCLNQ16625 522 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 NKAIN4Q8IVV8 208 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FAM26EQ8N5C1 309 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 DTNBP1Q96EV8 351 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SLC38A2Q96QD8 506 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 FBXO34Q9NWN3 711 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CNIH4Q9P003 139 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SLC7A7Q9UM01 511 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 IGHV5-10-1A0A0J9YXX1 117 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CENPVL1A0A0U1RR11 272 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SNTNA6NMZ2 147 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 NTN3O00634 580 aaPredicted RBP8.47□□□□□ -1.05
PDPN-201ENST00000294489 FMO6PO60774 539 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 CLPXO76031 633 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 IFNA16P05015 189 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 ADORA3P0DMS8 318 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SLC15A1P46059 708 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 SEPHS1P49903 392 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 ZNF136P52737 540 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 PSG6Q00889 435 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 NRMQ8IXM6 262 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 METTL27Q8N6F8 245 aaPredicted RBP8.47□□□□□ -1.05
PDPN-201ENST00000294489 ZNF615Q8N8J6 731 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 TBC1D15Q8TC07 691 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 OSTF1Q92882 214 aa8.47□□□□□ -1.05
PDPN-201ENST00000294489 VSTM2LQ96N03 204 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms