RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 RPRMLQ8N4K4 120 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 ZNF614Q8N883 585 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 CCDC120Q96HB5 630 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 OR2B2Q9GZK3 357 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 EXD2Q9NVH0 621 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 DKKL1Q9UK85 242 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 MKLN1Q9UL63 735 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.46
VPS28-201ENST00000292510 FLNBO75369 2602 aaKnown RBP12.14□□□□□ -0.47
VPS28-201ENST00000292510 OR14I1A6ND48 311 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 NPIPB9F8W1W9 429 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SCDO00767 359 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 OIP5O43482 229 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ZG16O60844 167 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SOX30O94993 753 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 AK1P00568 194 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
VPS28-201ENST00000292510 ETFAP13804 333 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 HOXB9P17482 250 aaPredicted RBP12.14□□□□□ -0.47
VPS28-201ENST00000292510 SEC24CP53992 1094 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ATP12AP54707 1039 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 IRX1P78414 480 aaPredicted RBP12.14□□□□□ -0.47
VPS28-201ENST00000292510 C17orf67Q0P5P2 114 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SYPL1Q16563 259 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 NDUFAF6Q330K2 333 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 METTL21CQ5VZV1 264 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ANKFN1Q8N957 763 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 C10orf82Q8WW14 230 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ROPN1LQ96C74 230 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SH3YL1Q96HL8 342 aaPredicted RBP12.14□□□□□ -0.47
VPS28-201ENST00000292510 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ZNF350Q9GZX5 532 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 ALKBH4Q9NXW9 302 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 TAS2R10Q9NYW0 307 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 SLC25A37Q9NYZ2 338 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 KCNE5Q9UJ90 142 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 MEMO1Q9Y316 297 aa12.14□□□□□ -0.47
VPS28-201ENST00000292510 A0A096LPI6 279 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 A0A1W2PP18 115 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 A0A1W2PQD3 144 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 BCKDKO14874 412 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 ZIC3O60481 467 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 TNFRSF21O75509 655 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 STX11O75558 287 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 KRT75O95678 551 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 AGR2O95994 175 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 BMP7P18075 431 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 CRATP43155 626 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 DSCR4P56555 118 aaPredicted RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 CRYZQ08257 329 aaKnown RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 MAPK14Q16539 360 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 GPAT3Q53EU6 434 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 WLSQ5T9L3 541 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 TYW3Q6IPR3 259 aaKnown RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 FRRS1Q6ZNA5 592 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 IFNEQ86WN2 208 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 MARVELD2Q8N4S9 558 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 OR5M1Q8NGP8 315 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 TIMP4Q99727 224 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 HOXD1Q9GZZ0 328 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 TMEM45AQ9NWC5 275 aa12.13□□□□□ -0.47
VPS28-201ENST00000292510 ASH1LQ9NR48 2969 aaKnown RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
VPS28-201ENST00000292510 PCNX3Q9H6A9 2034 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 WIPF3A6NGB9 483 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 CLIC1O00299 241 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 HCRTR2O43614 444 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 KIAA0513O60268 411 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 UGT2B17O75795 530 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 H6PDO95479 791 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 CHRM4P08173 479 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 NUDT7P0C024 238 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 HK1P19367 917 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 STARP49675 285 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 GFRA1P56159 465 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 ZNF117Q03924 483 aa12.12□□□□□ -0.47
VPS28-201ENST00000292510 CHRNEQ04844 493 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms