RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ZNF436Q9C0F3 470 aaPredicted RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 RNF167Q9H6Y7 350 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ASB6Q9NWX5 421 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 REV1Q9UBZ9 1251 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 PRODH2Q9UF12 536 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ZNF225Q9UK10 706 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 TACR1P25103 407 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 GJA5P36382 358 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 DHPSP49366 369 aaPredicted RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 WDR5P61964 334 aaKnown RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 Q6ZNX1 250 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 GKN2Q86XP6 184 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 DNAJC22Q8N4W6 341 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 TMEM163Q8TC26 289 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 PNPLA2Q96AD5 504 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ZNF419Q96HQ0 510 aaPredicted RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 PITX2Q99697 317 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 LINC00597Q9H2U6 94 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ANKRD33BA6NCL7 494 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 VIPR2P41587 438 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 CXCR4P61073 352 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 DHCR24Q15392 516 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 TBCEQ15813 527 aaPredicted RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 PLEKHN1Q494U1 663 aaPredicted RBP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ENTPD8Q5MY95 495 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 P4HA3Q7Z4N8 544 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ZNF619Q8N2I2 560 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 TCTEX1D2Q8WW35 142 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 ST6GALNAC5Q9BVH7 336 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 FBRSQ9HAH7 460 aa14.45□□□□□ -0.1
SHROOM4-201ENST00000289292 NPIPA2E9PIF3 369 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 NPIPA3F8WFD2 350 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 CAPZA1P52907 286 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 FXYD4P59646 89 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 FAM189A2Q15884 450 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 AAK1Q2M2I8 961 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 KIAA1211LQ6NV74 962 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ZNF529Q6P280 563 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 LIPIQ6XZB0 460 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 STK35Q8TDR2 534 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 OR5M11Q96RB7 305 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 QRSL1Q9H0R6 528 aaKnown RBP14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 LTB4R2Q9NPC1 389 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 OR52A4PA6NMU1 304 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ALDH3B2P48448 385 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 CTSCP53634 463 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 GPR157Q5UAW9 335 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 FAM205BPQ63HN1 556 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 OR1F2PQ96R84 312 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 PHB2Q99623 299 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 RAD51DO75771 328 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 M6PRP20645 277 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 GRM7Q14831 915 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 OR5H2Q8NGV7 314 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ARRDC2Q8TBH0 407 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 NOX3Q9HBY0 568 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 SLAMF7Q9NQ25 335 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 SGCEO43556 437 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 APEHP13798 732 aaKnown RBP14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ADPRMQ3LIE5 342 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 KCTD11Q693B1 232 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 TMEM239Q8WW34 195 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 THRSPQ92748 146 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 TGM5O43548 720 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 PROS1P07225 676 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 PRMT2P55345 433 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 DBPQ10586 325 aaPredicted RBP14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 RIN1Q13671 783 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 TAZQ16635 292 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 PELI3Q8N2H9 469 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ACBD4Q8NC06 268 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ARL11Q969Q4 196 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ZNF583Q96ND8 569 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 NEDD4LQ96PU5 975 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 MFFQ9GZY8 342 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 MVB12BQ9H7P6 319 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 ABI3Q9P2A4 366 aa14.44□□□□□ -0.1
SHROOM4-201ENST00000289292 CSO75390 466 aaKnown RBP14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 HMGN2P05204 90 aaKnown RBP14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 RACK1P63244 317 aaKnown RBP14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 RAB40BQ12829 278 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 SMIM3Q9BZL3 60 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 ALKAL2Q6UX46 152 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 CD163Q86VB7 1156 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 OR7G2Q8NG99 324 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 FIBINQ8TAL6 211 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 CDC6Q99741 560 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 NTN4Q9HB63 628 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 ASB4Q9Y574 426 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 KIAA0355O15063 1070 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 RAB3DO95716 219 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 RAB6AP20340 208 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 PRSS3P35030 304 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 PKDCCQ504Y2 493 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 APOOLQ6UXV4 268 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 GDPGP1Q6ZNW5 385 aa14.43□□□□□ -0.1
SHROOM4-201ENST00000289292 METTL2AQ96IZ6 378 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms