RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TRAM2Q15035 370 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 ZIC1Q15915 447 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 DECR1Q16698 335 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 OR4C11Q6IEV9 310 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 KIAA1161Q6NSJ0 714 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 ASB18Q6ZVZ8 466 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 MARCH9Q86YJ5 346 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CELF5Q8N6W0 485 aaKnown RBP9.7□□□□□ -0.86
SKA1-201ENST00000285116 ZBTB44Q8NCP5 570 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 OR6C4Q8NGE1 309 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 OR56A1Q8NGH5 318 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 DIO2Q92813 273 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 OSTF1Q92882 214 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 FAIM2Q9BWQ8 316 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 DPAGT1Q9H3H5 408 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SLC35C2Q9NQQ7 365 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CALML5Q9NZT1 146 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 KIF25Q9UIL4 384 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NUBP2Q9Y5Y2 271 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 IRAK3Q9Y616 596 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CACNG2Q9Y698 323 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 A0A1W2PPL8 197 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 FAM170BA6NMN3 283 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 K7ESM1 405 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NFATC1O95644 943 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CHRM4P08173 479 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 C6P13671 934 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 ELK1P19419 428 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 OMPP47874 163 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 TAS2R38P59533 333 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SHC2P98077 582 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PUDPQ08623 228 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CAMK2DQ13557 499 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NTRK2Q16620 822 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PLPP4Q5VZY2 271 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 RAET1GQ6H3X3 334 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
SKA1-201ENST00000285116 SRFBP1Q8NEF9 429 aaKnown RBP9.7□□□□□ -0.86
SKA1-201ENST00000285116 OR5AR1Q8NGP9 310 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 CEP76Q8TAP6 659 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 KCTD12Q96CX2 325 aaKnown RBP9.7□□□□□ -0.86
SKA1-201ENST00000285116 KLHL15Q96M94 604 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PLA2G12AQ9BZM1 189 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PRM3Q9NNZ6 103 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NUDT15Q9NV35 164 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 IL20Q9NYY1 176 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SCML1Q9UN30 329 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 ASF1AQ9Y294 204 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 TRAV6A0A075B6T7 132 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 A0A087WUU8 490 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GPR89AB7ZAQ6 455 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 NDUFA2O43678 99 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 EFCAB14O75071 495 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GPR89BP0CG08 455 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 DNASE1P24855 282 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 HTR1FP30939 366 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 NTSP30990 170 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TSFMP43897 325 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 MTNR1BP49286 362 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 MAP2K6P52564 334 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 C1orf53Q5VUE5 145 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 FAM46CQ5VWP2 391 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 METRNLQ641Q3 311 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GET4Q7L5D6 327 aaPredicted RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 OR8D4Q8NGM9 314 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 SMG7Q92540 1137 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 EXOSC8Q96B26 276 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 ARRDC3Q96B67 414 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SARGQ9BW04 601 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TEX12Q9BXU0 123 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 RNF32Q9H0A6 362 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 LINC00597Q9H2U6 94 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TEX10Q9NXF1 929 aaPredicted RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 CLCA2Q9UQC9 943 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TCF20Q9UGU0 1960 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 NINQ8N4C6 2090 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 MEIKINA0A087WXM9 373 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TEX13CA0A0J9YWL9 993 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 hCG_1807616A0A1W2PRN6 198 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 ANTXRLA6NF34 631 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GABRPO00591 440 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SURF4O15260 269 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 PEPDP12955 493 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GLULP15104 373 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 CXCL3P19876 107 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 AHCYP23526 432 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SSTR2P30874 369 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 PRKAR1BP31321 381 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 BTCP35070 178 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TSTA3Q13630 321 aaPredicted RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 TEAD2Q15562 447 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 LRRC28Q86X40 367 aaPredicted RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 KLHL36Q8N4N3 616 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 OR5M3Q8NGP4 307 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SORCS1Q8WY21 1168 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TFGQ92734 400 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms