RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CBLCQ9ULV8 474 aa23.33■■□□□ 1.33
ROM1-201ENST00000278833 LRP4O75096 1905 aa23.33■■□□□ 1.33
ROM1-201ENST00000278833 TICRRQ7Z2Z1 1910 aa23.33■■□□□ 1.32
ROM1-201ENST00000278833 A0A1W2PQF6 199 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 TRAPPC13A5PLN9 417 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 HLA-DPB1P04440 258 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 LAMP2P13473 410 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 SEC13P55735 322 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 RUNX2Q13950 521 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 RPL13AP3Q6NVV1 102 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 PARM1Q6UWI2 310 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 SPATC1Q76KD6 591 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 MEX3DQ86XN8 651 aaKnown RBP23.32■■□□□ 1.32
ROM1-201ENST00000278833 OR6F1Q8NGZ6 308 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 TMEM255BQ8WV15 326 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 YARS2Q9Y2Z4 477 aaKnown RBP23.32■■□□□ 1.32
ROM1-201ENST00000278833 P2RX6O15547 441 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 ATP1B1P05026 303 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 GPR4P46093 362 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 ZP2Q05996 745 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 CLEC12AQ5QGZ9 265 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 FAM131AQ6UXB0 335 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 ABHD13Q7L211 337 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 JPH3Q8WXH2 748 aaPredicted RBP23.32■■□□□ 1.32
ROM1-201ENST00000278833 FGF14Q92915 247 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 POLE3Q9NRF9 147 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 CLCA2Q9UQC9 943 aa23.32■■□□□ 1.32
ROM1-201ENST00000278833 POM121BA6NF01 834 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 SLC31A1O15431 190 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 PLOD3O60568 738 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 HCN1O60741 890 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 LYPD3O95274 346 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 GUSBP08236 651 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 CSF3P09919 207 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 UGT2B7P16662 529 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 MAT2AP31153 395 aaKnown RBP23.31■■□□□ 1.32
ROM1-201ENST00000278833 TGM4P49221 684 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 MXD1Q05195 221 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 MANEAQ5SRI9 462 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 FCRL6Q6DN72 434 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 DNAJA4Q8WW22 397 aaPredicted RBP23.31■■□□□ 1.32
ROM1-201ENST00000278833 TMEM203Q969S6 136 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 IL21RQ9HBE5 538 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 NCOR1O75376 2440 aa23.31■■□□□ 1.32
ROM1-201ENST00000278833 FAM221BA6H8Z2 402 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 FABP12A6NFH5 140 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 PIP5K1CO60331 668 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 CCNKO75909 580 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 DDOSTP39656 456 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 MAP3K8P41279 467 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 RDH10Q8IZV5 341 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 HOXB13Q92826 284 aaPredicted RBP23.3■■□□□ 1.32
ROM1-201ENST00000278833 SLC35B4Q969S0 331 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 TPK1Q9H3S4 243 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 HINT3Q9NQE9 182 aaKnown RBP23.3■■□□□ 1.32
ROM1-201ENST00000278833 POU2F3Q9UKI9 436 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 FBXL21Q9UKT6 434 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 SLC7A7Q9UM01 511 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 NTNG1Q9Y2I2 539 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 RGS13O14921 159 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 CTSVO60911 334 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 LALBAP00709 142 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 NID1P14543 1247 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 CD53P19397 219 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 COL9A1P20849 921 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 CD79BP40259 229 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 GCGRP47871 477 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 PRRT3Q5FWE3 981 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 ENPP7Q6UWV6 458 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 CDRT4Q8N9R6 151 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 SYT14Q8NB59 555 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 DIRAS2Q96HU8 199 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 FCRL4Q96PJ5 515 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 TM9SF2Q99805 663 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 UBQLN3Q9H347 655 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 INPP5EQ9NRR6 644 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 ZNF221Q9UK13 617 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 TMEM5Q9Y2B1 443 aa23.3■■□□□ 1.32
ROM1-201ENST00000278833 TRIOO75962 3097 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 UNC119BA6NIH7 251 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 STX11O75558 287 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 APOL3O95236 402 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 NTN1O95631 604 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 HOXB2P14652 356 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 AK4P27144 223 aaPredicted RBP23.29■■□□□ 1.32
ROM1-201ENST00000278833 FIGLAQ6QHK4 219 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 ZNF322Q6U7Q0 402 aaPredicted RBP23.29■■□□□ 1.32
ROM1-201ENST00000278833 OR4F15Q8NGB8 312 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 ZNF486Q96H40 463 aaPredicted RBP23.29■■□□□ 1.32
ROM1-201ENST00000278833 SLC6A17Q9H1V8 727 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 C14orf105Q9NVL8 296 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 NCKAP1Q9Y2A7 1128 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 ENTPD2Q9Y5L3 495 aa23.29■■□□□ 1.32
ROM1-201ENST00000278833 CDC42EP2O14613 210 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 SLC34A2O95436 690 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 SNRPNP63162 240 aaKnown RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 HOXC5Q00444 222 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 EOGTQ5NDL2 527 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 DCST2Q5T1A1 773 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 VASNQ6EMK4 673 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms