RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TTC36A6NLP5 189 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 TLX2O43763 284 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PRKYO43930 277 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PDGFBP01127 241 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 CT45A8P0DMV1 189 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 CT45A9P0DMV2 189 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 TDGF1P13385 188 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 FPR3P25089 353 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 TGFBR2P37173 567 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 RFX3P48380 749 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PGDP52209 483 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 ZXDAP98168 799 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PLAURQ03405 335 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF141Q15928 474 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 CT45A2Q5DJT8 189 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PDZK1Q5T2W1 519 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 MFSD4BQ5TF39 518 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 MEDAGQ5VYS4 303 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PMS2CLQ68D20 193 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 P2RY8Q86VZ1 359 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 KMT5CQ86Y97 462 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 GRAMD2AQ8IUY3 354 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 NRMQ8IXM6 262 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 RNF113BQ8IZP6 322 aaKnown RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 OR8D4Q8NGM9 314 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 C16orf52Q8NHV5 167 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 TEX47Q8TBZ9 253 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 OR1F2PQ96R84 312 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF559Q9BR84 538 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 CNPPD1Q9BV87 410 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 ITPAQ9BY32 194 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 IL20Q9NYY1 176 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 DNAJC27Q9NZQ0 273 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 SERTAD3Q9UJW9 196 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 PILRBQ9UKJ0 227 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 RPL36Q9Y3U8 105 aaKnown RBP8.88□□□□□ -0.99
TRIM55-201ENST00000276573 MMACHCQ9Y4U1 282 aa8.88□□□□□ -0.99
TRIM55-201ENST00000276573 A0A1B0GTQ1 180 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 NPIPB9F8W1W9 429 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 PIP5K1CO60331 668 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 CNOT3O75175 753 aaKnown RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 PTHP01270 115 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 CLPSP04118 112 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 ADRA2AP08913 450 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 MSL3P1P0C860 447 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 ATXN8OSP0DMR3 200 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 SPTBP11277 2137 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 CD36P16671 472 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 SNAPC1Q16533 368 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 PRAMEF17Q5VTA0 474 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 SLC27A4Q6P1M0 643 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 BCDIN3DQ7Z5W3 292 aaKnown RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 GATAD2AQ86YP4 633 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 GPR135Q8IZ08 494 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 POGLUT1Q8NBL1 392 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 OR7G1Q8NGA0 311 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 PTPMT1Q8WUK0 201 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 OSTF1Q92882 214 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 CCDC74AQ96AQ1 378 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 SENP5Q96HI0 755 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 NDC1Q9BTX1 674 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 G6PC3Q9BUM1 346 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 TSSK6Q9BXA6 273 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 Q9N2J8 555 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 DHCR7Q9UBM7 475 aaKnown RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 PRODH2Q9UF12 536 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 TESQ9UGI8 421 aaKnown RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF223Q9UK11 482 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 GMEB2Q9UKD1 530 aa8.87□□□□□ -0.99
TRIM55-201ENST00000276573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 TP53BP1Q12888 1972 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-201ENST00000276573 C17orf105B2RV13 164 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 DSCR3O14972 297 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 SLC22A1O15245 554 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 FOXD2O60548 495 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ADORA3P0DMS8 318 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 PNLIPP16233 465 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 EPHA8P29322 1005 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-201ENST00000276573 LIPAP38571 399 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ACAA2P42765 397 aaKnown RBP8.86□□□□□ -0.99
TRIM55-201ENST00000276573 GPR4P46093 362 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ATP12AP54707 1039 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 PSMD4P55036 377 aaKnown RBP8.86□□□□□ -0.99
TRIM55-201ENST00000276573 OCA2Q04671 838 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 SQSTM1Q13501 440 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TIGD6Q17RP2 521 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ZSWIM7Q19AV6 140 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TMEM71Q6P5X7 295 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF613Q6PF04 617 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 WDR88Q6ZMY6 472 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TMEM151BQ8IW70 566 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 BCORP1Q8N888 145 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TBC1D15Q8TC07 691 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TMEM239Q8WW34 195 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF501Q96CX3 271 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-201ENST00000276573 TMEM80Q96HE8 168 aa8.86□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF582Q96NG8 517 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms