RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF680Q8NEM1 530 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 NUP43Q8NFH3 380 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 DACT3Q96B18 629 aaPredicted RBP25.65■■□□□ 1.7
CBX4-201ENST00000269397 ARSGQ96EG1 525 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 SLC41A3Q96GZ6 507 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 DHRS9Q9BPW9 319 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 ZBP1Q9H171 429 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 UBQLN3Q9H347 655 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 GHITMQ9H3K2 345 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 NT5DC2Q9H857 520 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 SLC7A7Q9UM01 511 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 NOTCH4Q99466 2003 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 SYNDIG1LA6NDD5 238 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 AIFM1O95831 613 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 PCCBP05166 539 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 ZNF77Q15935 545 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 SFXN4Q6P4A7 337 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 LYPD4Q6UWN0 246 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 SFTPA1Q8IWL2 248 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 UBL7Q96S82 380 aaPredicted RBP25.64■■□□□ 1.7
CBX4-201ENST00000269397 CDCP1Q9H5V8 836 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 BEX1Q9HBH7 125 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 ADAM29Q9UKF5 820 aa25.64■■□□□ 1.7
CBX4-201ENST00000269397 UNC80Q8N2C7 3258 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 A0A0B4J203 849 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 VEGFDO43915 354 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 PRNPP04156 253 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 NDUFV2P19404 249 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 SSTR2P30874 369 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 BCL6P41182 706 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 BHLHB9Q6PI77 547 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 GPR137Q96N19 417 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 PHF11Q9UIL8 331 aa25.64■■□□□ 1.69
CBX4-201ENST00000269397 SNRNP200O75643 2136 aaKnown RBP25.64■■□□□ 1.69
CBX4-201ENST00000269397 PRRT4C9JH25 899 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 GAAP10253 952 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 GIFP27352 417 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 CERS1P27544 350 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ACSL1P33121 698 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ANXA11P50995 505 aaKnown RBP25.63■■□□□ 1.69
CBX4-201ENST00000269397 AGERQ15109 404 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 POU4F3Q15319 338 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 FCRLBQ6BAA4 426 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ACOT4Q8N9L9 421 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 TRMT10AQ8TBZ6 339 aaKnown RBP25.63■■□□□ 1.69
CBX4-201ENST00000269397 DPH1Q9BZG8 443 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ENTPD4Q9Y227 616 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 DOCK9Q9BZ29 2069 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 A0A1W2PPK0 400 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 CIB4A0PJX0 185 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 SLC9B1P1A6NJY1 282 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ZGLP1P0C6A0 271 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 HOXD10P28358 340 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ACVR1BP36896 505 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 CCR6P51684 374 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ARHGAP19Q14CB8 494 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 SYT9Q86SS6 491 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 LRRTM4Q86VH4 590 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 OR5W2Q8NH69 310 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 SCMH1Q96GD3 660 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ZNF764Q96H86 408 aaPredicted RBP25.63■■□□□ 1.69
CBX4-201ENST00000269397 ZFP3Q96NJ6 502 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 FERD3LQ96RJ6 166 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 TTTY10Q9BZA0 68 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 ELF5Q9UKW6 265 aaPredicted RBP25.63■■□□□ 1.69
CBX4-201ENST00000269397 SPEF1Q9Y4P9 236 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 CHD7Q9P2D1 2997 aa25.63■■□□□ 1.69
CBX4-201ENST00000269397 XIRP2A4UGR9 3374 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 TEX13CA0A0J9YWL9 993 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 DAPL1A0PJW8 107 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 J3QRE1 110 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 SYT5O00445 386 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 FNDC3BQ53EP0 1204 aaKnown RBP25.62■■□□□ 1.69
CBX4-201ENST00000269397 CEACAM19Q7Z692 300 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 GLTPQ9NZD2 209 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 MARK1Q9P0L2 795 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 MAFFQ9ULX9 164 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 ANGPT1Q15389 498 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 DHCR24Q15392 516 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 DECR1Q16698 335 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 TMEM64Q6YI46 380 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 ESPNLQ6ZVH7 1005 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 C17orf47Q8NEP4 570 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 OR13C5Q8NGS8 318 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 OMA1Q96E52 524 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 PRKAG2Q9UGJ0 569 aa25.62■■□□□ 1.69
CBX4-201ENST00000269397 KLF4O43474 513 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 NUDT1P36639 197 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 RFX3P48380 749 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 RPS7P62081 194 aaKnown RBP25.61■■□□□ 1.69
CBX4-201ENST00000269397 DPTQ07507 201 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 FGFBP1Q14512 234 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 SLC36A2Q495M3 483 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 MBOAT2Q6ZWT7 520 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 OR56A1Q8NGH5 318 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 DOK4Q8TEW6 326 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 LRRC3BQ96PB8 259 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 OR51J1Q9H342 316 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 CENPVL1A0A0U1RR11 272 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 FZD7O75084 574 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms