RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CCNYL3P0C7X3 344 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CT45A8P0DMV1 189 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CT45A9P0DMV2 189 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 POLR2IP36954 125 aaKnown RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 HLCSP50747 726 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 PGDP52209 483 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 SLC37A1P57057 533 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 GABARAPL2P60520 117 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CXCR4P61073 352 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 DCAF7P61962 342 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 PSPHP78330 225 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 TEKQ02763 1124 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CD47Q08722 323 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 COX10Q12887 443 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 RAPSNQ13702 412 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 ZNF141Q15928 474 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 FLYWCH1Q4VC44 716 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CT45A2Q5DJT8 189 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 C6orf141Q5SZD1 244 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 NPSR1Q6W5P4 371 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 RBM44Q6ZP01 1051 aaKnown RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 RANBP3LQ86VV4 465 aaPredicted RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 CMIPQ8IY22 773 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CLIP4Q8N3C7 705 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 AQP11Q8NBQ7 271 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 RCBTB1Q8NDN9 531 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 TSLPQ969D9 159 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 NXPE2Q96DL1 559 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 SENP5Q96HI0 755 aaPredicted RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 NIPSNAP1Q9BPW8 284 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 VN1R1Q9GZP7 353 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 RLIMQ9NVW2 624 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 GPR55Q9Y2T6 319 aaPredicted RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 CLCA3PQ9Y6N3 262 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 PKD1L2Q7Z442 2459 aa14.21□□□□□ -0.14
COPS3-201ENST00000268717 SMIM31A0A1B0GVY4 71 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 NPIPB9F8W1W9 429 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 TAF4O00268 1085 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 CSO75390 466 aaKnown RBP14.2□□□□□ -0.14
COPS3-201ENST00000268717 LCN1P31025 176 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
COPS3-201ENST00000268717 PPICP45877 212 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 UGT2B15P54855 530 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 TAS2R41P59536 307 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 RPP38P78345 283 aaKnown RBP14.2□□□□□ -0.14
COPS3-201ENST00000268717 DCDP81605 110 aaKnown RBP14.2□□□□□ -0.14
COPS3-201ENST00000268717 IL1RL1Q01638 556 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 RTP5Q14D33 572 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 TRAM2Q15035 370 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 SEC23BQ15437 767 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 MAPK14Q16539 360 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 ISXQ2M1V0 245 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 NKAIN1Q4KMZ8 207 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 MFSD4BQ5TF39 518 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 ZNF385CQ66K41 422 aaPredicted RBP14.2□□□□□ -0.14
COPS3-201ENST00000268717 PWWP2BQ6NUJ5 590 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 AGBL5Q8NDL9 886 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 SLC38A4Q969I6 547 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 SYNDIG1Q9H7V2 258 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 SLC22A11Q9NSA0 550 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 TESQ9UGI8 421 aaKnown RBP14.2□□□□□ -0.14
COPS3-201ENST00000268717 KCNE5Q9UJ90 142 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 CBLCQ9ULV8 474 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 DTX4Q9Y2E6 619 aa14.2□□□□□ -0.14
COPS3-201ENST00000268717 OR6C76A6NM76 312 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 POLR1CO15160 346 aaPredicted RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 OR10H3O60404 316 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 TPST2O60704 377 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 CYP7B1O75881 506 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 DDAH2O95865 285 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 GASTP01350 101 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 GGT2P36268 569 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 IFNGR2P38484 337 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ZNF136P52737 540 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 OCA2Q04671 838 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 NSDHLQ15738 373 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 VWA2Q5GFL6 755 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 MRPL2Q5T653 305 aaKnown RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 PHF19Q5T6S3 580 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PGBD2Q6P3X8 592 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PODNL1Q6PEZ8 512 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 HMGN2P46Q86SG4 172 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 MORN4Q8NDC4 146 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 SLC2A12Q8TD20 617 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 MCHR1Q99705 422 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ITPAQ9BY32 194 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 UCK2Q9BZX2 261 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 SLC26A1Q9H2B4 701 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PNO1Q9NRX1 252 aaKnown RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 FBXO34Q9NWN3 711 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 SEC16AO15027 2179 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 FER1L5A0AVI2 2057 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 NINQ8N4C6 2090 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 NUP210LQ5VU65 1888 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 DSPP15924 2871 aaKnown RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 FRG2CA6NGY1 282 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PEX12O00623 359 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 CYP4B1P13584 511 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms