RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PRAP1Q96NZ9 151 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TSNAXQ99598 290 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PITX2Q99697 317 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF471Q9BX82 626 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 HPF1Q9NWY4 346 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 LRRTM2O43300 516 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 NCR1O76036 304 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 RASGRP1O95267 797 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ALDOBP05062 364 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ARAFP10398 606 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CMPK1P30085 196 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ILKQ13418 452 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ATXN7L3Q14CW9 347 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 BAK1Q16611 211 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SIGIRRQ6IA17 410 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PLBD1Q6P4A8 553 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 C3P1Q6ZMU1 363 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CCDC190Q86UF4 302 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 MEX3DQ86XN8 651 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR135Q8IZ08 494 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 DEFB123Q8N688 67 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CHST4Q8NCG5 386 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 MRGPRX3Q96LB0 322 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF354BQ96LW1 612 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SAP130Q9H0E3 1048 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 C5AR2Q9P296 337 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF225Q9UK10 706 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 KCNK6Q9Y257 313 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 RASD1Q9Y272 281 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PLXNA3P51805 1871 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEM265A0A087WTH1 108 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC22A31A6NKX4 558 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ARPC5O15511 151 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC22A5O76082 557 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 AGR2O95994 175 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TACSTD2P09758 323 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 P2RY2P41231 377 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 RBM34P42696 430 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 DPTQ07507 201 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF155Q12901 538 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PXDC1Q5TGL8 231 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ADAMTSL4Q6UY14 1074 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PM20D2Q8IYS1 436 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 LCN9Q8WX39 176 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CA14Q9ULX7 337 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CSNK1G3Q9Y6M4 447 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 M0R082 166 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 GTPBP1O00178 669 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 SMAD9O15198 467 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 RBBP9O75884 186 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 KRT33AO76009 404 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 SOX30O94993 753 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ACP2P11117 423 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ACPPP15309 386 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 CTHP32929 405 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 CTBP2P56545 445 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 TOMM20Q15388 145 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZMAT1Q5H9K5 638 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 FAHD1Q6P587 224 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 PODNL1Q6PEZ8 512 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 BCDIN3DQ7Z5W3 292 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 L3MBTL4Q8NA19 623 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 OR5J2Q8NH18 312 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZCCHC10Q8TBK6 192 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 NEIL2Q969S2 332 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ALOXE3Q9BYJ1 711 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 MVB12BQ9H7P6 319 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 MRPS30Q9NP92 439 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 OR6C2Q9NZP2 312 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZFC3H1O60293 1989 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 PTPRDP23468 1912 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 A0A0X1KG70 313 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 CPED1A4D0V7 1026 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 GABRPO00591 440 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 CSN2P05814 226 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 CD2P06729 351 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC35G6P0C7Q6 338 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 MSL3P1P0C860 447 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 TSC22D1Q15714 1073 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ENPP7Q6UWV6 458 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 FAM129CQ86XR2 697 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 OR51A7Q8NH64 312 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ZC3H10Q96K80 434 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 WDR92Q96MX6 357 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 DHRS9Q9BPW9 319 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 ALG8Q9BVK2 526 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 QPCTLQ9NXS2 382 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 C5orf51A6NDU8 294 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 NDUFS4O43181 175 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 HLA-DQA1Q5Y7H0 255 aa10.83□□□□□ -0.68
CLSTN3-201ENST00000266546 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms