RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 EGFL8Q99944 293 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 NFKBIL1Q9UBC1 381 aaPredicted RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 LAMP5Q9UJQ1 280 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 TRDV1A0A1B0GX56 115 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 C1orf226A1L170 272 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 CD63P08962 238 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 SMIM6P0DI80 62 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 PTHLHP12272 177 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 SLC11A2P49281 568 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 ZNF140P52738 457 aaPredicted RBP8.21□□□□□ -1.09
VAPB-201ENST00000265619 ZNF33AQ06730 810 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 MAD2L1Q13257 205 aaPredicted RBP8.21□□□□□ -1.09
VAPB-201ENST00000265619 VEZF1Q14119 521 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 TGIF1Q15583 401 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 HES5Q5TA89 166 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 DCAF12L2Q5VW00 463 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 SLC30A6Q6NXT4 461 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 FAM180BQ6P0A1 224 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 ETV3LQ6ZN32 361 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 OAFQ86UD1 273 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 ADAMTS19Q8TE59 1207 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 OTULINQ96BN8 352 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 NUDT4Q9NZJ9 180 aa8.21□□□□□ -1.09
VAPB-201ENST00000265619 A0A0A6YYC8 382 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 OR6C76A6NM76 312 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 I3L1I5 382 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 ARPC1BO15143 372 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TMEM127O75204 238 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 UBXN7O94888 489 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 IFNA4P05014 189 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 NR2F6P10588 404 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 HOXB6P17509 224 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 MAT1AQ00266 395 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 LGALS3BPQ08380 585 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 LRRC74AQ0VAA2 488 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 CLINT1Q14677 625 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 CMIPQ8IY22 773 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 CCDC116Q8IYX3 515 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 C1orf52Q8N6N3 182 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 IL17RCQ8NAC3 791 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 OR5AK3PQ8NH89 298 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 SELENOMQ8WWX9 145 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 GTF3AQ92664 365 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TRIM43Q96BQ3 446 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 ZNF558Q96NG5 402 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 ARHGAP9Q9BRR9 750 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 MVB12BQ9H7P6 319 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 SEBOXQ9HB31 216 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TDP1Q9NUW8 608 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 ASIC5Q9NY37 505 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 ZNF69Q9UC07 566 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 EPHA6Q9UF33 1036 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 HS3ST4Q9Y661 456 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 TRIOBPQ9H2D6 2365 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 IRAK2O43187 625 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 MPZL2O60487 215 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 CKMP06732 381 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 OSMP13725 252 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 COX7A2P14406 83 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 RPS24P62847 133 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TWF1Q12792 350 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 MAP4K2Q12851 820 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 UBXN2BQ14CS0 331 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TPGS1Q6ZTW0 290 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 DNAJB7Q7Z6W7 309 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 TMEM185AQ8NFB2 350 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 FGF11Q92914 225 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 BADQ92934 168 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 RNFT2Q96EX2 444 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 RBM18Q96H35 190 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 UBL7Q96S82 380 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 BOCQ9BWV1 1114 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 PLA2G12AQ9BZM1 189 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 WDR26Q9H7D7 661 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 ISG20L2Q9H9L3 353 aaKnown RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 C2orf42Q9NWW7 574 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 SPG21Q9NZD8 308 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 AKAP7Q9P0M2 348 aaPredicted RBP8.21□□□□□ -1.1
VAPB-201ENST00000265619 MOKQ9UQ07 419 aa8.21□□□□□ -1.1
VAPB-201ENST00000265619 SLC19A2O60779 497 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MYOGP15173 224 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 UGT2B7P16662 529 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 OR1E1P30953 314 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 ADH7P40394 386 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 RGRP47804 291 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 RFX3P48380 749 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MTAPQ13126 283 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CSRP2Q16527 193 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 NOXRED1Q6NXP6 359 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MZT2AQ6P582 158 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 CASP12Q6UXS9 341 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 NR4A3Q92570 626 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MYEOVQ96EZ4 313 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 MNTQ99583 582 aa8.2□□□□□ -1.1
VAPB-201ENST00000265619 YIPF4Q9BSR8 244 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms