RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CPOQ8IVL8 374 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 OR6V1Q8N148 313 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PCSK9Q8NBP7 692 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 HAVCR2Q8TDQ0 301 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 POF1BQ8WVV4 589 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SORCS1Q8WY21 1168 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PTP4A1Q93096 173 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 RGMAQ96B86 450 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 WBP1Q96G27 269 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ARHGDIGQ99819 225 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 AIF1LQ9BQI0 150 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ZCCHC2Q9C0B9 1178 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 CTPS2Q9NRF8 586 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 CALML5Q9NZT1 146 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ADAM29Q9UKF5 820 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 MRPS7Q9Y2R9 242 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 TRAV1-2A0A0B4J238 106 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 A0A0G2JK05 382 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 A0A1B0GW55 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 OR6C65A6NJZ3 312 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 A8MXK9 166 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 WASH3PC4AMC7 463 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 B3GALNT1O75752 331 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 TOXO94900 526 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 EPPINO95925 133 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SYPP08247 313 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L2P0CJ85 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L3P0CJ86 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L4P0CJ87 422 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L5P0CJ88 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L6P0CJ89 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4L7P0CJ90 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 RPL17P18621 184 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 KELP23276 732 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 UAP1L1Q3KQV9 507 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 B3GNTL1Q67FW5 361 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 TMEM64Q6YI46 380 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PXKQ7Z7A4 578 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 FAM129CQ86XR2 697 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 CFAP206Q8IYR0 622 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SIRT6Q8N6T7 355 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 OR5D16Q8NGK9 328 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SMIM4Q8WVI0 70 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 MOAP1Q96BY2 351 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 PELI2Q9HAT8 420 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 NANSQ9NR45 359 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 KLHL1Q9NR64 748 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 OR6C2Q9NZP2 312 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DUX4Q9UBX2 424 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SOCS6O14544 535 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 HYAL3O43820 417 aaPredicted RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 MT-ND4P03905 459 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CPN1P15169 458 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 PSMB1P20618 241 aaKnown RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 NFYAP23511 347 aaPredicted RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CALCRP30988 508 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 NTSP30990 170 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 OR10A3P58181 314 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 FZD5Q13467 585 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 GRIN2CQ14957 1233 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 TAF1CQ15572 869 aaPredicted RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ELFN2Q5R3F8 820 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 SEZ6L2Q6UXD5 910 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 MEX3DQ86XN8 651 aaKnown RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 EID2Q8N6I1 236 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 BBS1Q8NFJ9 593 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CXorf40AQ8TE69 158 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 DIO2Q92813 273 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 SLC22A12Q96S37 553 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 MS4A8Q9BY19 250 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 HINT3Q9NQE9 182 aaKnown RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CLEC4EQ9ULY5 219 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 SIRT4Q9Y6E7 314 aaPredicted RBP11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 PLSCR5A0PG75 271 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ANKRD61A6NGH8 418 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 REM1O75628 298 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ABLIM3O94929 683 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 OLFM2O95897 454 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ALDOBP05062 364 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CHRM4P08173 479 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CTSAP10619 480 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ICAM2P13598 275 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 TYRP1P17643 537 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 SELENOPP49908 381 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 CCR9P51686 369 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 ARFIP1P53367 373 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 EPHB3P54753 998 aa11.57□□□□□ -0.56
CHMP2B-201ENST00000263780 NRG3P56975 720 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms