RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 PLXNB2O15031 1838 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 ERAL1O75616 437 aaKnown RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 AGFG1P52594 562 aaKnown RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 WNT3P56703 355 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 PPP3R1P63098 170 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 NTRK2Q16620 822 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 SVBPQ8N300 66 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 SLC25A46Q96AG3 418 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 TBX5Q99593 518 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 OR6C2Q9NZP2 312 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 CXXC1Q9P0U4 656 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 STUB1Q9UNE7 303 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 TMEM200CA6NKL6 621 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 NCR1O76036 304 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 NTN1O95631 604 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 H2AFB2P0C5Z0 115 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 RFX3P48380 749 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 PFN3P60673 137 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 TEX30Q5JUR7 227 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 C12orf66Q96MD2 445 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 TTTY10Q9BZA0 68 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
SCARF1-201ENST00000263071 B3GAT2Q9NPZ5 323 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 NKIRAS2Q9NYR9 191 aa13.31□□□□□ -0.28
SCARF1-201ENST00000263071 ASCC3Q8N3C0 2202 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 MANFP55145 182 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 HSD11B1LQ7Z5J1 315 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TCTEX1D2Q8WW35 142 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 ASB11Q8WXH4 323 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 HRASLS5Q96KN8 279 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 RAD9AQ99638 391 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SH2B3Q9UQQ2 575 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 A0A1W2PRB8 838 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SCAMP2O15127 329 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 IFNW1P05000 195 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CBSLP0DN79 551 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 VIPR1P32241 457 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CBSP35520 551 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SELENOWP63302 87 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 FAM109BQ6ICB4 259 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TPRG1Q6ZUI0 275 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 LHFPL3Q86UP9 236 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 BOLLQ8N9W6 283 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 L3MBTL4Q8NA19 623 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SEMA3GQ9NS98 782 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TREM2Q9NZC2 230 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SNX11Q9Y5W9 270 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 MYO16Q9Y6X6 1858 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 LRIT2A6NDA9 550 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 RB1P06400 928 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 IL3P08700 152 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SPI1P17947 270 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 GABRB1P18505 474 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 MMP12P39900 470 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CRYBA2P53672 197 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 PDZK1IP1Q13113 114 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CRTC2Q53ET0 693 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-201ENST00000263071 COMMD6Q7Z4G1 85 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TMEM25Q86YD3 366 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SERPINA12Q8IW75 414 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CARFQ8N187 725 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 BPIFCQ8NFQ6 507 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 OR5D16Q8NGK9 328 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 ADAMTS19Q8TE59 1207 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 PLD4Q96BZ4 506 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 FBXO17Q96EF6 278 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 OR2AG1Q9H205 316 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 PLCXD1Q9NUJ7 323 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 SPEGQ15772 3267 aa13.3□□□□□ -0.28
SCARF1-201ENST00000263071 CASP8AP2Q9UKL3 1982 aa13.29□□□□□ -0.28
SCARF1-201ENST00000263071 FEZF1A0PJY2 475 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms