RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 OR52D1Q9H346 318 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 MED20Q9H944 212 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 PSORS1C1Q9UIG5 152 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 PCDHGB2Q9Y5G2 931 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 RNGTTO60942 597 aaKnown RBP12.77□□□□□ -0.36
TCF3-201ENST00000262965 RNH1P13489 461 aaKnown RBP12.77□□□□□ -0.36
TCF3-201ENST00000262965 SGSHP51688 502 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 ADARB1P78563 741 aaKnown RBP12.77□□□□□ -0.36
TCF3-201ENST00000262965 RAB33AQ14088 237 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 FOXN4Q96NZ1 517 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 ZNF226Q9NYT6 803 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.36
TCF3-201ENST00000262965 HLA-FP30511 346 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 PBX2P40425 430 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 PGFP49763 221 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 HERV-K104P61576 105 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 RAB40BQ12829 278 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 FIGLAQ6QHK4 219 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 C12orf40Q86WS4 652 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.37
TCF3-201ENST00000262965 VRK3Q8IV63 474 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 ZNF565Q8N9K5 539 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 RIT1Q92963 219 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 G6PC3Q9BUM1 346 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 PRODH2Q9UF12 536 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 NDUFB2O95178 105 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
TCF3-201ENST00000262965 PRSS3P35030 304 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 GLP1RP43220 463 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 ISL2Q96A47 359 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 RAB7BQ96AH8 199 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 TCEAL4Q96EI5 215 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 MVB12BQ9H7P6 319 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 LHX3Q9UBR4 397 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.37
TCF3-201ENST00000262965 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 TUBG1P23258 451 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CLDN12P56749 244 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 CST6Q15828 149 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.76□□□□□ -0.37
TCF3-201ENST00000262965 TMEM205Q6UW68 189 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ALKAL1Q6UXT8 129 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ZER1Q7Z7L7 766 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 SLC38A5Q8WUX1 472 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CDS1Q92903 461 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 PRRC1Q96M27 445 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 TGM7Q96PF1 710 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 EDARQ9UNE0 448 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ARAFP10398 606 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ISL1P61371 349 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 RPS25P62851 125 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 CHRNEQ04844 493 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 PLCXD2Q0VAA5 305 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 MLLT11Q13015 90 aaPredicted RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 OR5AK2Q8NH90 309 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ACOT11Q8WXI4 607 aaPredicted RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 SLC35B4Q969S0 331 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 PDLIM5Q96HC4 596 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 MKRN2Q9H000 416 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 RCE1Q9Y256 329 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 TAP2Q03519 686 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ARSKQ6UWY0 536 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 SSX6Q7RTT6 188 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 KCNN1Q92952 543 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 S100PBPQ96BU1 408 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 HRASLS5Q96KN8 279 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 LATS1O95835 1130 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CFIP05156 583 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 FUT1P19526 365 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 AMY2BP19961 511 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 NPR2P20594 1047 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 ERVK-25P63136 954 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 POU4F2Q12837 409 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CTU2Q2VPK5 515 aaKnown RBP12.76□□□□□ -0.37
TCF3-201ENST00000262965 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 CCSMST1Q4G0I0 132 aa12.76□□□□□ -0.37
TCF3-201ENST00000262965 PARS2Q7L3T8 475 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms