RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 ASCL1P50553 236 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 DIO3P55073 304 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 CASP9P55211 416 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 RPS26P62854 115 aaKnown RBP13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 LRIG3Q6UXM1 1119 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 RIMKLAQ8IXN7 391 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 CLECL1Q8IZS7 167 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 LINC01560Q8TB33 94 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 HOXB13Q92826 284 aaPredicted RBP13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 MTERF3Q96E29 417 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 C1GALT1C1Q96EU7 318 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 CLCF1Q9UBD9 225 aa13.14□□□□□ -0.31
RBFOX2-201ENST00000262829 NDUFB5O43674 189 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 CHMP24386 653 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 PSMD4P55036 377 aaKnown RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 PRR5P85299 388 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 OR4F3Q6IEY1 312 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 OLIG3Q7RTU3 272 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 ADGRE4PQ86SQ3 457 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 FIG4Q92562 907 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 ZNF845Q96IR2 970 aaPredicted RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 LIME1Q9H400 295 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 EIF3LQ9Y262 564 aaKnown RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 MRPS18CQ9Y3D5 142 aaKnown RBP13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 F8P00451 2351 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 BIRC5O15392 142 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 OIP5O43482 229 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 SOAT1P35610 550 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 NME5P56597 212 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 EMX2Q04743 252 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 C17orf67Q0P5P2 114 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 CD226Q15762 336 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 NDUFAF6Q330K2 333 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 PPP4R4Q6NUP7 873 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 ANKRD46Q86W74 232 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 OR5D16Q8NGK9 328 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 OR5P2Q8WZ92 322 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 COQ8BQ96D53 544 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 ARSGQ96EG1 525 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 TM9SF2Q99805 663 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 DUSP26Q9BV47 211 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 PINK1Q9BXM7 581 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 TMEM185BQ9H7F4 350 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 GPATCH2Q9NW75 528 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 RAP2CQ9Y3L5 183 aa13.13□□□□□ -0.31
RBFOX2-201ENST00000262829 C9JVG2 144 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 TM9SF1O15321 606 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 RCBTB2O95199 551 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 C1QCP02747 245 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 IFI6P09912 130 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 TBXA2RP21731 343 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 OPRM1P35372 400 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 PRIM2P49643 509 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 HBA1P69905 142 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 POU6F2P78424 691 aaPredicted RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 BST1Q10588 318 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 STX3Q13277 289 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 MLC1Q15049 377 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 CHMP1BQ7LBR1 199 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 LSRQ86X29 649 aaPredicted RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 CNEP1R1Q8N9A8 125 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 SSU72Q9NP77 194 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 DNAJB12Q9NXW2 375 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
RBFOX2-201ENST00000262829 SLC22A20A6NK97 555 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 ALG1L2C9J202 215 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 CTAG2O75638 210 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 MYZAPP0CAP1 466 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 PEPDP12955 493 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 HPGDP15428 266 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 IL11P20809 199 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 CPA2P48052 419 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 CLDN8P56748 225 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 SIRPAP78324 504 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 CDC73Q6P1J9 531 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms