RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TLCD2A6NGC4 264 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 LMO7DNF2Z398 122 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 KCNK2O95069 426 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MED26O95402 600 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 PRG2P13727 222 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 STARD6P59095 220 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 RAB40BQ12829 278 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ITGADQ13349 1161 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 OR1Q1Q15612 314 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 DEFB133Q30KQ1 61 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF404Q494X3 552 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 FLYWCH1Q4VC44 716 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 TCTE1Q5JU00 501 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CLEC12AQ5QGZ9 265 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF620Q6ZNG0 422 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 Q6ZNX1 250 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 C17orf82Q86X59 251 aaPredicted RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 RNF113BQ8IZP6 322 aaKnown RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 CLDN22Q8N7P3 220 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 HLA-CQ95604 372 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 HSPA12BQ96MM6 686 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF285Q96NJ3 590 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 DGAT2Q96PD7 388 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 TGM7Q96PF1 710 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 NELL2Q99435 816 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CENPOQ9BU64 300 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 FAM117AQ9C073 453 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 PDE7BQ9NP56 450 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 C14orf105Q9NVL8 296 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MRPS18AQ9NVS2 196 aaKnown RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 CCDC59Q9P031 241 aaKnown RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 EPHA6Q9UF33 1036 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 LHX6Q9UPM6 363 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CDH10Q9Y6N8 788 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 EYSQ5T1H1 3165 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 HRO43593 1189 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 PFDN1O60925 122 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CDC123O75794 336 aaPredicted RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 GUSBP08236 651 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MYL12AP19105 171 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 S1PR1P21453 382 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 HTR2AP28223 471 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 GABRA4P48169 554 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 RFX3P48380 749 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 NXPH1P58417 271 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 IGLV3-21P80748 117 aaPredicted RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 INAQ16352 499 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 SSX1Q16384 188 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 TMEM44Q2T9K0 475 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MINDY4Q4G0A6 757 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 PTCRAQ6ISU1 281 aaPredicted RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 SLC30A6Q6NXT4 461 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ATCAYQ86WG3 371 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CACTIN-AS1Q8N1I8 211 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 POGLUT1Q8NBL1 392 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 B4GALNT2Q8NHY0 566 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 RNF217Q8TC41 542 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 RFKQ969G6 155 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MMABQ96EY8 250 aaPredicted RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 SPACA7Q96KW9 195 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 PRSS27Q9BQR3 290 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF559Q9BR84 538 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 MED17Q9NVC6 651 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 CHCHD3Q9NX63 227 aaKnown RBP12□□□□□ -0.49
SPTLC1-201ENST00000262554 WNT16Q9UBV4 365 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 GPR52Q9Y2T5 361 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 A3GALT2U3KPV4 340 aa12□□□□□ -0.49
SPTLC1-201ENST00000262554 GON4LQ3T8J9 2241 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 UNC119BA6NIH7 251 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 METTL15A6NJ78 407 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 RHPN2P1A8MT19 583 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 KDM4EB2RXH2 506 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 TGFBR3LH3BV60 316 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 HMGN1P05114 100 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 BMP4P12644 408 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 DRD5P21918 477 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 MTNR1AP48039 350 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 EMDP50402 254 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 LIMK1P53667 647 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 EPHA4P54764 986 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 GFERP55789 205 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 MAT1AQ00266 395 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 PSG6Q00889 435 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 RGS21Q2M5E4 152 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 PGGHGQ32M88 737 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 C14orf28Q4W4Y0 310 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 C3orf38Q5JPI3 329 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 OGFOD3Q6PK18 319 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 OR2T33Q8NG76 320 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 OR9Q1Q8NGQ5 310 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 OR4Q3Q8NH05 313 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 TMEM239Q8WW34 195 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 RNFT2Q96EX2 444 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 ZDHHC12Q96GR4 267 aa11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 ZNF578Q96N58 590 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-201ENST00000262554 DACH2Q96NX9 599 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms