RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 IL18Q14116 193 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 TPD52L1Q16890 204 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 NKAIN1Q4KMZ8 207 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 VWA2Q5GFL6 755 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ARMC12Q5T9G4 340 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 LIN9Q5TKA1 542 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 LIPJQ5W064 366 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 PAQR9Q6ZVX9 377 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 C12orf56Q8IXR9 622 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CENPLQ8N0S6 344 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 DNAAF3Q8N9W5 541 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 OR52B4Q8NGK2 314 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 RDH11Q8TC12 318 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 DDI1Q8WTU0 396 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 FAM222BQ8WU58 562 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 U2AF1L4Q8WU68 220 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 SELENOMQ8WWX9 145 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 HIST1H2ACQ93077 130 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 EFHD2Q96C19 240 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ANKRD27Q96NW4 1050 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ACCSQ96QU6 501 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF607Q96SK3 696 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 UPF3BQ9BZI7 483 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CRNKL1Q9BZJ0 848 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 NMNAT2Q9BZQ4 307 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 TRIM4Q9C037 500 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 LIME1Q9H400 295 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 UCK1Q9HA47 277 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 STARD5Q9NSY2 213 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 FAM120CQ9NX05 1096 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 HYPKQ9NX55 129 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 KLHL28Q9NXS3 571 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF346Q9UL40 294 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 MGAT4BQ9UQ53 548 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 KLHDC2Q9Y2U9 406 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CBY1Q9Y3M2 126 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 TIMM22Q9Y584 194 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 MAPK8IP3Q9UPT6 1336 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FAM240BA0A1B0GVZ2 78 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FOXI3A8MTJ6 420 aaPredicted RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 RNF212BA8MTL3 300 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 SPECC1L-ADORA2AF8WAN1 911 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 XPO1O14980 1071 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 HDAC3O15379 428 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 CRTAPO75718 401 aaPredicted RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 TBX6O95947 436 aaPredicted RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 KRT14P02533 472 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 MELTFP08582 738 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 OR9G9P0C7N8 305 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FOLR2P14207 255 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 DRD5P21918 477 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 GATA2P23769 480 aaPredicted RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 HTR2AP28223 471 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 AXLP30530 894 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 MAGEA1P43355 309 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 MAGEA9P43362 315 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 RANBP1P43487 201 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 NLRP11P59045 1033 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 LMO4P61968 165 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 NOP14P78316 857 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 NCBP1Q09161 790 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 SRSF5Q13243 272 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 PDK4Q16654 411 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ZSWIM7Q19AV6 140 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 USH1GQ495M9 461 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 UNC50Q53HI1 259 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 TCTEX1D4Q5JR98 221 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 LINC00242Q5T6M2 205 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 SULT1C3Q6IMI6 304 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 STEAP1BQ6NZ63 245 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 EMBQ6PCB8 327 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 TIPARPQ7Z3E1 657 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 SERINC5Q86VE9 423 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ERO1BQ86YB8 467 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 POM121L12Q8N7R1 296 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF491Q8N8L2 437 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF565Q8N9K5 539 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ICA1LQ8NDH6 482 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 KIFAP3Q92845 792 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 MSANTD3Q96H12 275 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 C1orf147Q96MC9 270 aaPredicted RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FOXN4Q96NZ1 517 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 CGREF1Q99674 301 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 C19orf43Q9BQ61 176 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 CBWD1Q9BRT8 395 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FTHL17Q9BXU8 183 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 MRPL37Q9BZE1 423 aaKnown RBP3.51□□□□□ -1.85
CCDC54-201ENST00000261058 SIRPDQ9H106 197 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ETNK2Q9NVF9 386 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 KIAA1257Q9ULG3 409 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 ENTPD4Q9Y227 616 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 CFL2Q9Y281 166 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 FBXO7Q9Y3I1 522 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 PRDM2Q13029 1718 aa3.51□□□□□ -1.85
CCDC54-201ENST00000261058 A0A0U1RRA0 63 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 A0A1B0GTQ1 180 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 OR6C74A6NCV1 312 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 LRRIQ3A6PVS8 624 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms