RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 HTR2AP28223 471 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 PTPN6P29350 595 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 XCR1P46094 333 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 COMMD7Q86VX2 200 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 CHDHQ8NE62 594 aaPredicted RBP11.4□□□□□ -0.58
COL8A1-201ENST00000261037 RRNAD1Q96FB5 475 aaKnown RBP11.4□□□□□ -0.58
COL8A1-201ENST00000261037 OR5B12Q96R08 314 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 SLC30A3Q99726 388 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 ABRACLQ9P1F3 81 aa11.4□□□□□ -0.58
COL8A1-201ENST00000261037 A0A0U1RQK1 487 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 PRSS38A1L453 326 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 PRAMEF26H0Y7S4 382 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 FANCGO15287 622 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 TIMP2P16035 220 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 SDC1P18827 310 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 ADH6P28332 368 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 CDKN3Q16667 212 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM239Q8WW34 195 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 DCUN1D4Q92564 292 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 SENP5Q96HI0 755 aaPredicted RBP11.4□□□□□ -0.59
COL8A1-201ENST00000261037 CACNG6Q9BXT2 260 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 ACPTQ9BZG2 426 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF334Q9HCZ1 680 aaPredicted RBP11.4□□□□□ -0.59
COL8A1-201ENST00000261037 CD93Q9NPY3 652 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 ASF1BQ9NVP2 202 aa11.4□□□□□ -0.59
COL8A1-201ENST00000261037 GABRR3A8MPY1 467 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 POLR1CO15160 346 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 OR8U9P0C7N5 309 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PRPS1P60891 318 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 WDR5P61964 334 aaKnown RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 FGL1Q08830 312 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 CTSL3PQ5NE16 218 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PNCKQ6P2M8 343 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 UNQ6126/PRO20091Q6UXV3 157 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PRSS48Q7RTY5 328 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 VWA5B2Q8N398 1253 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 ACOT4Q8N9L9 421 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 SYNPRQ8TBG9 265 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 AP1S3Q96PC3 154 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 NUDT22Q9BRQ3 303 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 MEPEQ9NQ76 525 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 MYH8P13535 1937 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 J3KTA2 159 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 NPC1O15118 1278 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 LRRTM2O43300 516 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 SERPINA5P05154 406 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 EDN3P14138 238 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 POU3F2P20265 443 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PCGF2P35227 344 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 MEX3BQ6ZN04 569 aaKnown RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 TMEFF1Q8IYR6 380 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 OR13J1Q8NGT2 312 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 B3GNT2Q9NY97 397 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 A6NIN4 97 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 RNASET2O00584 256 aaKnown RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 UBFD1O14562 309 aaKnown RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 WDPCPO95876 746 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 IVDP26440 423 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 DAP3P51398 398 aaKnown RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 TUBB3Q13509 450 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 EMC10Q5UCC4 262 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 C17orf99Q6UX52 265 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 TSPYL5Q86VY4 417 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 TM9SF4Q92544 642 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 RTP3Q9BQQ7 232 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PLEKHJ1Q9NW61 149 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 WDR37Q9Y2I8 494 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 HSPE1-MOB4S4R3N1 261 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 TRIM64CA6NLI5 447 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 SULT2B1O00204 365 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PPP6CO00743 305 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 PEX14O75381 377 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 RAB3AP20336 220 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 LUMP51884 338 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-201ENST00000261037 EMP2P54851 167 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 THSD1Q9NS62 852 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 POLHQ9Y253 713 aa11.39□□□□□ -0.59
COL8A1-201ENST00000261037 SPDEFO95238 335 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF140P52738 457 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MAT1AQ00266 395 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ACY1Q03154 408 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ZP2Q05996 745 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM31Q5JXX7 168 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ANKRD54Q6NXT1 300 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM184AQ6ZMB5 413 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CDRT4Q8N9R6 151 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 SDSLQ96GA7 329 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MROH6A6NGR9 719 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ACTL6BO94805 426 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 BMP4P12644 408 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 DRD1P21728 446 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CHMP24386 653 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 GCH1P30793 250 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CNIH2Q6PI25 160 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 TCEAL8Q8IYN2 117 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms