RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GABRA3P34903 492 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 CASP3P42574 277 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 DGKQP52824 942 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 BNIP2Q12982 314 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 MRPL49Q13405 166 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 FUNDC1Q8IVP5 155 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 MIER2Q8N344 545 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 OR56A1Q8NGH5 318 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SFXN5Q8TD22 340 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SLC9A6Q92581 669 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 C16orf58Q96GQ5 468 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SLC29A1Q99808 456 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 GPATCH1Q9BRR8 931 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 CCM2LQ9NUG4 571 aaPredicted RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 TUBA8Q9NY65 449 aaPredicted RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 RSL24D1Q9UHA3 163 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SHANK1Q9Y566 2161 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 GCN1Q92616 2671 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 NPIPA5E9PKD4 350 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 TRMUO75648 421 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 WISP2O76076 250 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 NKX2-2O95096 273 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 CPSF4O95639 269 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 HMGN2P05204 90 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 IL12BP29460 328 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 UQCRFS1P47985 274 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 ALDH3B2P48448 385 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 PRIM2P49643 509 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 PNLIPRP2P54317 469 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 PLGLB1Q02325 96 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 FOXO1Q12778 655 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 TP53BP2Q13625 1128 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 ELOAQ14241 798 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SPATS1Q496A3 300 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SIAH3Q8IW03 269 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 SLC16A11Q8NCK7 471 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 OR4A15Q8NGL6 344 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 GPR151Q8TDV0 419 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 TMCO6Q96DC7 493 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 OR52E6Q96RD3 313 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 NODALQ96S42 347 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 DOHHQ9BU89 302 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 ANGPTL4Q9BY76 406 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 TSPAN10Q9H1Z9 355 aaPredicted RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 GID8Q9NWU2 228 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 ABCD2Q9UBJ2 740 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 BTNL2Q9UIR0 455 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 NPIPA1Q9UND3 350 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 H3BSA7 217 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 NR5A2O00482 541 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 ANGPT2O15123 496 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 TIPRLO75663 272 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 IL6P05231 212 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 HSD17B1P14061 328 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 SOAT1P35610 550 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 PPIAP62937 165 aaKnown RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 EFR3AQ14156 821 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 LASP1Q14847 261 aaKnown RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 DECR1Q16698 335 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 KRTCAP3Q53RY4 240 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 INTS11Q5TA45 600 aaKnown RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 BICRALQ6AI39 1079 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 TMEM81Q6P7N7 255 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 BHLHB9Q6PI77 547 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 CANT1Q8WVQ1 401 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 EFHD2Q96C19 240 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 YIPF4Q9BSR8 244 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 TTTY12Q9BZ98 90 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 OCEL1Q9H607 264 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 METTL7AQ9H8H3 244 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 IL1RL2Q9HB29 575 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 SEC14L3Q9UDX4 400 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 MRTO4Q9UKD2 239 aaKnown RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 UBR5O95071 2799 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 TFECO14948 347 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 ASNA1O43681 348 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 HS6ST1O60243 411 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 GLSO94925 669 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 SNX4O95219 450 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 ALOX5P09917 674 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 ACP2P11117 423 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 MRPL19P49406 292 aaKnown RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 KCNC4Q03721 635 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 LRRC74AQ0VAA2 488 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 RP1L1Q8IWN7 2480 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-201ENST00000260130 OR5AK3PQ8NH89 298 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 FBXO30Q8TB52 745 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 PIK3R3Q92569 461 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 GPR137Q96N19 417 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 CCDC115Q96NT0 180 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 SLC39A3Q9BRY0 314 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 ACTRT3Q9BYD9 372 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 C8orf4Q9NR00 106 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 GPATCH2Q9NW75 528 aa15.35■□□□□ 0.05
SDCBP-201ENST00000260130 GXYLT2A0PJZ3 443 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ACOT7O00154 380 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 KCNH1O95259 989 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 ATP6V1B2P21281 511 aa15.34■□□□□ 0.05
SDCBP-201ENST00000260130 PSMA4P25789 261 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms