RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CES3Q6UWW8 571 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 ANGPTL5Q86XS5 388 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 XYLT1Q86Y38 959 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 EDEM1Q92611 657 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 MALSU1Q96EH3 234 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 PEBP4Q96S96 227 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
CCNA1-201ENST00000255465 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 ABCG5Q9H222 651 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 BARX1Q9HBU1 254 aaPredicted RBP11.1□□□□□ -0.63
CCNA1-201ENST00000255465 TXNL4BQ9NX01 149 aaKnown RBP11.1□□□□□ -0.63
CCNA1-201ENST00000255465 CFAP97Q9P2B7 532 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF629Q9UEG4 869 aaPredicted RBP11.1□□□□□ -0.63
CCNA1-201ENST00000255465 FBXL3Q9UKT7 428 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 EXO1Q9UQ84 846 aaKnown RBP11.1□□□□□ -0.63
CCNA1-201ENST00000255465 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
CCNA1-201ENST00000255465 FAM95CA0A1B0GW59 222 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 M0QYT0 321 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ADAM10O14672 748 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 GPR37L1O60883 481 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 RDH16O75452 317 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ATP6AP2O75787 350 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 AP2A2O94973 939 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ALDOBP05062 364 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 MAT2AP31153 395 aaKnown RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 BTCP35070 178 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 TAP2Q03519 686 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 BOP1Q14137 746 aaKnown RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 SPHARQ15513 63 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF549Q6P9A3 640 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 CIR1Q86X95 450 aaPredicted RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF383Q8NA42 475 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 OR10K1Q8NGX5 313 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ROBO4Q8WZ75 1007 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 WBP2Q969T9 261 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 MTFMTQ96DP5 389 aaKnown RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 MS4A4EQ96PG1 132 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 TEX101Q9BY14 249 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 POLDIP3Q9BY77 421 aaKnown RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 WDR26Q9H7D7 661 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 METTL17Q9H7H0 456 aaPredicted RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 TUBA4BQ9H853 241 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 REEP1Q9H902 201 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
CCNA1-201ENST00000255465 HEBP1Q9NRV9 189 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
CCNA1-201ENST00000255465 A0A087X0M5 115 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 A0A1B0GX30 115 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 AGAP14A8MT82 685 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 GPR31O00270 319 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 FFAR3O14843 346 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 GPR42O15529 346 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ICOSLGO75144 302 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CBR3O75828 277 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 AP2A1O95782 977 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 TFP02787 698 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 IRF1P10914 325 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CERS1P27544 350 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ADH7P40394 386 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RFX3P48380 749 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 HCCSP53701 268 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ZP1P60852 638 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 EFEMP1Q12805 493 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MLF2Q15773 248 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ST3GAL2Q16842 350 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 FAM46CQ5VWP2 391 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SLC22A10Q63ZE4 541 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF660Q6AZW8 331 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CLEC6AQ6EIG7 209 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 LRRN1Q6UXK5 716 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 USP30Q70CQ3 517 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RABEPKQ7Z6M1 372 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CALHM3Q86XJ0 350 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SLC41A1Q8IVJ1 513 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PYROXD2Q8N2H3 581 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 B3GNT7Q8NFL0 401 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RPLP0P6Q8NHW5 317 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CSGALNACT1Q8TDX6 532 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RNF139Q8WU17 664 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SPACA7Q96KW9 195 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms