RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TRPV4Q9HBA0 871 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 HHATLQ9HCP6 504 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 BCL2L10Q9HD36 194 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ATPIF1Q9UII2 106 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 DMDP11532 3685 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 NUDT19A8MXV4 375 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FOXS1O43638 330 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ERCC1P07992 297 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RAB3BP20337 219 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 HTR1FP30939 366 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 UQCRC1P31930 480 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PCBP4P57723 403 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PLAURQ03405 335 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 MLC1Q15049 377 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CCDC58Q4VC31 144 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FNDC3BQ53EP0 1204 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ENTPD8Q5MY95 495 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ARHGAP11AQ6P4F7 1023 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 BTN2A1Q7KYR7 527 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PDZD9Q8IXQ8 264 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SAMD12Q8N8I0 201 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 BMPERQ8N8U9 685 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RASGEF1AQ8N9B8 481 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CHST14Q8NCH0 376 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FCAMRQ8WWV6 532 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SCLYQ96I15 445 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR51I1Q9H343 314 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SIRT3Q9NTG7 399 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 B4GALT6Q9UBX8 382 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CAMK2AQ9UQM7 478 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 IGKV1-8A0A0C4DH67 115 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CDHR4A6H8M9 788 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SHISA7A6NL88 538 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 A8MV72 311 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GPR89AB7ZAQ6 455 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 LEFTY2O00292 366 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RGS11O94810 467 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GASTP01350 101 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GPR89BP0CG08 455 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 HPGDP15428 266 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 POU3F3P20264 500 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 NDUFS1P28331 727 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TEAD1P28347 426 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SOX3P41225 446 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OMPP47874 163 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 DECR1Q16698 335 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 UBE3DQ7Z6J8 389 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 EXOSC8Q96B26 276 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TMED9Q9BVK6 235 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 STRADBQ9C0K7 418 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR52A5Q9H2C5 316 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLAMF7Q9NQ25 335 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 BABAM2Q9NXR7 383 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CFAP97Q9P2B7 532 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 KLHL9Q9P2J3 617 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLC6A14Q9UN76 642 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 EXPH5Q8NEV8 1989 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OTOL1A6NHN0 477 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C4orf51C9J302 202 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 H3BQ06 376 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GABRPO00591 440 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MID1O15344 667 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 KLF4O43474 513 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 JMJD7P0C870 316 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SPNP16150 400 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NPPBP16860 134 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 FPR3P25089 353 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CMPK1P30085 196 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SLC1A3P43003 542 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RFX3P48380 749 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 DLX5P56178 289 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PSMA6P60900 246 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 FPGSQ05932 587 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 FUT5Q11128 374 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 HSPB3Q12988 150 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LRRC32Q14392 662 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PUM1Q14671 1186 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 IRF4Q15306 451 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF628Q5EBL2 1059 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PGBD2Q6P3X8 592 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SPATC1Q76KD6 591 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C12orf40Q86WS4 652 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C10orf53Q8N6V4 93 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ELP4Q96EB1 424 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MYOCQ99972 504 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NIPSNAP1Q9BPW8 284 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 WFDC6Q9BQY6 131 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 WRAP53Q9BUR4 548 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LGR4Q9BXB1 951 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GSX2Q9BZM3 304 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 OSGEPL1Q9H4B0 414 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 WASH6PQ9NQA3 447 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NTMQ9P121 344 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 HCN3Q9P1Z3 774 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TBC1D24Q9ULP9 559 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SNX11Q9Y5W9 270 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UNC119BA6NIH7 251 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms