RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 MED11Q9P086 117 aa22.11■■□□□ 1.13
SDF2L1-201ENST00000248958 USP9YO00507 2555 aaPredicted RBP22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 CCDC154A6NI56 674 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 LINC01387J3KSC0 135 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 ATP8B1O43520 1251 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 CPN1P15169 458 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 POLR2JP52435 117 aaKnown RBP22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 GFRA1P56159 465 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 NUP107P57740 925 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 ARHGAP11BQ3KRB8 267 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 ATAD3BQ5T9A4 648 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 RTL6Q6ICC9 239 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 NCCRP1Q6ZVX7 275 aaPredicted RBP22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 ZAR1Q86SH2 424 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 CLEC4FQ8N1N0 589 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 CA5BP1Q8WTZ4 195 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 SDCCAG3Q96C92 435 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 WDYHV1Q96HA8 205 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 SFXN2Q96NB2 322 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 SDF2Q99470 211 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 EBF4Q9BQW3 602 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 OR51I1Q9H343 314 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 MED4Q9NPJ6 270 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 CAMK2AQ9UQM7 478 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 KCNE3Q9Y6H6 103 aa22.1■■□□□ 1.13
SDF2L1-201ENST00000248958 SPTBN1Q01082 2364 aaKnown RBP22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 FAM234BA2RU67 622 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 C9JVG2 144 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 PRSS44E7EML9 344 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 RFXANKO14593 260 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 ZIC3O60481 467 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 EDF1O60869 148 aaKnown RBP22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 GUSBP08236 651 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 DCTP40126 519 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 KHKP50053 298 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 ATP12AP54707 1039 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 RPS26P62854 115 aaKnown RBP22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 FLYWCH1Q4VC44 716 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 ZNF621Q6ZSS3 439 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 RPRMLQ8N4K4 120 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 OIT3Q8WWZ8 545 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 C1GALT1C1Q96EU7 318 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 SERHL2Q9H4I8 314 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 TMEM45AQ9NWC5 275 aa22.09■■□□□ 1.13
SDF2L1-201ENST00000248958 B4DXG7 233 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 H3BNH8 94 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 STX11O75558 287 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 EPPINO95925 133 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 GLI4P10075 376 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 HK1P19367 917 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 CHRNB4P30926 498 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 MAGEA8P43361 318 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 RCAN2Q14206 197 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 BCL2A1Q16548 175 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 ZNF630Q2M218 657 aaPredicted RBP22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 HEPHL1Q6MZM0 1159 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 C16orf62Q7Z3J2 963 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 ZPLD1Q8TCW7 415 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 ITCHQ96J02 903 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 CHST11Q9NPF2 352 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 POLE3Q9NRF9 147 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 RNF6Q9Y252 685 aa22.08■■□□□ 1.13
SDF2L1-201ENST00000248958 PCNX1Q96RV3 2341 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 A0A087WZY1 265 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 C17orf51A8MQB3 221 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 KRT75O95678 551 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 ZCCHC18P0CG32 403 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 ZFP36L2P47974 494 aaKnown RBP22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 ATP4BP51164 291 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 ACSF3Q4G176 576 aaPredicted RBP22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 RIPPLY2Q5TAB7 128 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 LACC1Q8IV20 430 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 OR10Q1Q8NGQ4 319 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 XAGE5Q8WWM1 108 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 PIGQQ9BRB3 760 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 INPP5KQ9BT40 448 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 NMUR2Q9GZQ4 415 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 RPH3AQ9Y2J0 694 aaPredicted RBP22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 PCNX3Q9H6A9 2034 aa22.07■■□□□ 1.12
SDF2L1-201ENST00000248958 NPIPB9F8W1W9 429 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 ANP32DO95626 131 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 OR12D1P0DN82 309 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 PEPDP12955 493 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 HTR1EP28566 365 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 CDKN2CP42773 168 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 KLHL26Q53HC5 615 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 DCST1Q5T197 706 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 RAET1LQ5VY80 246 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 NSUN5P2Q63ZY6 315 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 OR9I1Q8NGQ6 314 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 PHOSPHO1Q8TCT1 267 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 RABEP2Q9H5N1 569 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 CALHM2Q9HA72 323 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 DTNAQ9Y4J8 743 aa22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 SPTAN1Q13813 2472 aaKnown RBP22.06■■□□□ 1.12
SDF2L1-201ENST00000248958 CD8B2A6NJW9 211 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF708P17019 499 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 TIMP3P35625 211 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 LHX2P50458 406 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 B3GALT5-AS1P59052 145 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms