RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FFAR1O14842 300 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ZSCAN9O15535 394 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ZW10O43264 779 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 GUCY1B2O75343 617 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 UPK1BO75841 260 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ABHD16AO95870 558 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PTHP01270 115 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 BCHEP06276 602 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ELAVL4P26378 380 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PPP2R1BP30154 601 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 S100A5P33763 92 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TRIM23P36406 574 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 VIPR2P41587 438 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CCT3P49368 545 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 UGT2B15P54855 530 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CASP9P55211 416 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 LIM2P55344 173 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CSNK1G2P78368 415 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ABATP80404 500 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 IFITM3Q01628 133 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 FPGSQ05932 587 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PRDX1Q06830 199 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 NCF4Q15080 339 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 WSCD2Q2TBF2 565 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 FAM78AQ5JUQ0 283 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MMAAQ8IVH4 418 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 OR8J1Q8NGP2 316 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 BBS10Q8TAM1 723 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 HERVK_113Q902F9 699 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ITFG2Q969R8 447 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 F2RL3Q96RI0 385 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 FUZQ9BT04 418 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SORBS1Q9BX66 1292 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ZBTB20Q9HC78 741 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 LHX9Q9NQ69 397 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PRSS16Q9NQE7 514 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TRNAU1APQ9NX07 287 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 GDE1Q9NZC3 331 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CPNE7Q9UBL6 633 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SLC23A2Q9UGH3 650 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TMEM98Q9Y2Y6 226 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 RPL36Q9Y3U8 105 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ALPK3Q96L96 1907 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 A0A075B6Q4 140 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TRBV4-1A0A0J9YWV2 114 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 GAGE12BA1L429 117 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 BOLA2-SMG1P6H3BVE0 249 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 DSCR3O14972 297 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 CASC3O15234 703 aaKnown RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TMPRSS11DO60235 418 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 NTSP30990 170 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 CSTF2P33240 577 aaKnown RBP eCLIP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 SOX6P35712 828 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TSFMP43897 325 aaKnown RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 GSSP48637 474 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 KHKP50053 298 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 RAB28P51157 221 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 NUDT6P53370 316 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 ENPP2Q13822 863 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 GANABQ14697 944 aaKnown RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 MAPK11Q15759 364 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 ZIC1Q15915 447 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 OR4C11Q6IEV9 310 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TNFAIP8L2Q6P589 184 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 MMP21Q8N119 569 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TBC1D19Q8N5T2 526 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 LMNTD1Q8N9Z9 388 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 OR2L8Q8NGY9 312 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 CREB3L4Q8TEY5 395 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 SLC35G5Q96KT7 338 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TRNT1Q96Q11 434 aaKnown RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 MGLLQ99685 303 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TREX2Q9BQ50 279 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 ACAT2Q9BWD1 397 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 TAPBPLQ9BX59 468 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 AMBNQ9NP70 447 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 SLC35C2Q9NQQ7 365 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 PHPT1Q9NRX4 125 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 SEC14L3Q9UDX4 400 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 PLAGL1Q9UM63 463 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 SLC9A8Q9Y2E8 581 aa7.34□□□□□ -1.23
CXCR4-201ENST00000241393 PCYT1BQ9Y5K3 369 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-201ENST00000241393 PDE4DIPQ5VU43 2346 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 IRGMA1A4Y4 181 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 LRIT2A6NDA9 550 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 TBC1D3BA6NDS4 549 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 POM121BA6NF01 834 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 IGLON5A6NGN9 336 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 ANHXE9PGG2 379 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 LOC110117498-PIK3R3F6TDL0 507 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 RTCAO00442 366 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SYT5O00445 386 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 OR1F1O43749 312 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SLC28A2O43868 658 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SH3BP5O60239 455 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 B4GALT2O60909 372 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 UGT2B17O75795 530 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PTTG1O95997 202 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PCCBP05166 539 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms