RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ACTR6Q9GZN1 396 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 MED20Q9H944 212 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 IL20Q9NYY1 176 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ALPK2Q86TB3 2170 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 COL4A4P53420 1690 aaPredicted RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 UGDHO60701 494 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 RP2O75695 350 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC1A3P43003 542 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 STXBP1P61764 594 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC3A1Q07837 685 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 TMEM115Q12893 351 aaPredicted RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 VASNQ6EMK4 673 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 RGS7BPQ6MZT1 257 aaPredicted RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC27A4Q6P1M0 643 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 C22orf39Q6P5X5 142 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ZCCHC12Q6PEW1 402 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ECHDC3Q96DC8 303 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SCMH1Q96GD3 660 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 FUZQ9BT04 418 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 PTTG3PQ9NZH4 202 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF69Q9UC07 566 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC45A1Q9Y2W3 748 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 FAM170BA6NMN3 283 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 AGAP14A8MT82 685 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 MRPL3P09001 348 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 C1GALT1C1LP0DN25 315 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 GNSP15586 552 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 HK1P19367 917 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 GABRR2P28476 465 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 GABRA5P31644 462 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 MMP12P39900 470 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 MELKQ14680 651 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 LASP1Q14847 261 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 FAM26EQ8N5C1 309 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 PDXPQ96GD0 296 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF354BQ96LW1 612 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 PDCD10Q9BUL8 212 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 RNF32Q9H0A6 362 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 DDX31Q9H8H2 851 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 ZCCHC3Q9NUD5 404 aaKnown RBP13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC13A4Q9UKG4 626 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 A4GNTQ9UNA3 340 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 RASD1Q9Y272 281 aa13.26□□□□□ -0.29
PCDHB3-201ENST00000231130 HELZP42694 1942 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 PLXND1Q9Y4D7 1925 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SGK494L7N484 410 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 HMGN4O00479 90 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 PRODHO43272 600 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ACP2P11117 423 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 HSD3B1P14060 373 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 HSD3B2P26439 372 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 HLA-FP30511 346 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 RAB13P51153 203 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SNTB2Q13425 540 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ARHGAP15Q53QZ3 475 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 TMCO2Q7Z6W1 182 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SIAH3Q8IW03 269 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 CXXC1Q9P0U4 656 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 CTSFQ9UBX1 484 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 NOSIPQ9Y314 301 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SOCS6O14544 535 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 B4GALT2O60909 372 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 EIF4EP06730 217 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ACSL1P33121 698 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ACVR1BP36896 505 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 MAPK8P45983 427 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 OCLNQ16625 522 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF750Q32MQ0 723 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 NHLRC3Q5JS37 347 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC36A4Q6YBV0 504 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 OVCH2Q7RTZ1 564 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 PRICKLE2Q7Z3G6 844 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 C12orf45Q8N5I9 185 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ADAT1Q9BUB4 502 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 SLC19A3Q9BZV2 496 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 OR2AG1Q9H205 316 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 ZSCAN32Q9NX65 697 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 TESQ9UGI8 421 aaKnown RBP13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 NUBP2Q9Y5Y2 271 aa13.25□□□□□ -0.29
PCDHB3-201ENST00000231130 RASGRP1O95267 797 aa13.24□□□□□ -0.29
PCDHB3-201ENST00000231130 RB1P06400 928 aa13.24□□□□□ -0.29
PCDHB3-201ENST00000231130 SYN1P17600 705 aa13.24□□□□□ -0.29
PCDHB3-201ENST00000231130 NFYAP23511 347 aaPredicted RBP13.24□□□□□ -0.29
PCDHB3-201ENST00000231130 AHRP35869 848 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms