RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 OR51Q1Q8NH59 317 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 CLDN23Q96B33 292 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 TMEM80Q96HE8 168 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 VSTM2LQ96N03 204 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 MGLLQ99685 303 aa13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 LMF2Q9BU23 707 aaKnown RBP13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
PRKAB1-201ENST00000229328 CH25HO95992 272 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 AK1P00568 194 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 CLK1P49759 484 aaKnown RBP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 CFHR1Q03591 330 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 NCF4Q15080 339 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 NNATQ16517 81 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 TSTQ16762 297 aaKnown RBP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 PDZK1Q5T2W1 519 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 MEDAGQ5VYS4 303 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 MRGPREQ86SM8 312 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 PFN4Q8NHR9 129 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 ZHX1-C8orf76Q96EF9 292 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 MRPS33Q9Y291 106 aaKnown RBP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 LOC100506127A0A0U1RQW1 187 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 TRAPPC13A5PLN9 417 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 ADAM11O75078 769 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 APOL3O95236 402 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 CSTF2P33240 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 STAT5AP42229 794 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 PGDP52209 483 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SLC25A30Q5SVS4 291 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SLC25A45Q8N413 288 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 TMEM163Q8TC26 289 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SH3YL1Q96HL8 342 aaPredicted RBP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 DGAT2Q96PD7 388 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 CNPPD1Q9BV87 410 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 SLIRPQ9GZT3 109 aaKnown RBP13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 DCSTAMPQ9H295 470 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 PRDM6Q9NQX0 595 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 OSGIN1Q9UJX0 560 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 ERVK-19Q9WJR5 959 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 ASXL3Q9C0F0 2248 aa13.36□□□□□ -0.27
PRKAB1-201ENST00000229328 A0A1B0GVT2 93 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CLDN4O14493 209 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 BCAT2O15382 392 aaPredicted RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 PRKNO60260 465 aaPredicted RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 FOSL2P15408 326 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CD1CP29017 333 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 GPR3P46089 330 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CXCL12P48061 93 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 C21orf59P57076 290 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 SKP1P63208 163 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 SSX1Q16384 188 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 DGUOKQ16854 277 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 AMZ1Q400G9 498 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 PRAMEF17Q5VTA0 474 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 GARNL3Q5VVW2 1013 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 BTLAQ7Z6A9 289 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ZDHHC12Q96GR4 267 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 OPALINQ96PE5 141 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CENPOQ9BU64 300 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 TBC1D23Q9NUY8 699 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 IL20Q9NYY1 176 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 PCDHGA3Q9Y5H0 932 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 IGHV1OR21-1A0A087WYE8 117 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 H3BMH7 237 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CSO75390 466 aaKnown RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 RPLP0P05388 317 aaKnown RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 IDUAP35475 653 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 LIMK1P53667 647 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 GAS1P54826 345 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 SNAP47Q5SQN1 464 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ZNF620Q6ZNG0 422 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ADCK1Q86TW2 530 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ATCAYQ86WG3 371 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CROCCP3Q8IVE0 287 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 SLC35F3Q8IY50 421 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 Q8N9G6 341 aaPredicted RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 RCBTB1Q8NDN9 531 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 PLEKHA8Q96JA3 519 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 CHCHD6Q9BRQ6 235 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 DPH1Q9BZG8 443 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 RAB33BQ9H082 229 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 TESQ9UGI8 421 aaKnown RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
PRKAB1-201ENST00000229328 hCG_2014768A0A024R1R8 64 aa13.34□□□□□ -0.27
PRKAB1-201ENST00000229328 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
PRKAB1-201ENST00000229328 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
PRKAB1-201ENST00000229328 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
PRKAB1-201ENST00000229328 MAKP20794 623 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms