RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 ZP2Q05996 745 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 EXOSC7Q15024 291 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SMAD2Q15796 467 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 PCGF3Q3KNV8 242 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 KDELC1Q6UW63 502 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 KIF18BQ86Y91 864 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 NPWQ8N729 165 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 TSNAXQ99598 290 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MGLLQ99685 303 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MYH3P11055 1940 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CBX7O95931 251 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 FUT1P19526 365 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CD38P28907 300 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KRBOX4Q5JUW0 171 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 WDR53Q7Z5U6 358 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 GRAMD2AQ8IUY3 354 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CDRT4Q8N9R6 151 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 OR5W2Q8NH69 310 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 HIPK2Q9H2X6 1198 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 GGT1P19440 569 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CX3CR1P49238 355 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 HSD17B7P56937 341 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KIR2DS3Q14952 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF423Q2M1K9 1284 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MORN1Q5T089 497 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 DPPA4Q7L190 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KIAA0907Q7Z7F0 614 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 NAGSQ8N159 534 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PIGCQ92535 297 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 TSPAN10Q9H1Z9 355 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF355PQ9NSJ1 428 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 SERTAD4Q9NUC0 356 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PTHP01270 115 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ALDOBP05062 364 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 GMPRP36959 345 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RGNQ15493 299 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 TAS1R1Q7RTX1 841 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM40Q8WWA1 233 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 FUBP1Q96AE4 644 aaKnown RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RTP3Q9BQQ7 232 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CPNE7Q9UBL6 633 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MYH7P12883 1935 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PRKYO43930 277 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 BMP4P12644 408 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CAV2P51636 162 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 GPR149Q86SP6 731 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PAPD5Q8NDF8 572 aaKnown RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 FGF13Q92913 245 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RRP8O43159 456 aaKnown RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PTGER1P34995 402 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ACTBP60709 375 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ACTG1P63261 375 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MALSU1Q96EH3 234 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 NMNAT1Q9HAN9 279 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 SACM1LQ9NTJ5 587 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CCM2LQ9NUG4 571 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CA5BQ9Y2D0 317 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MYH11P35749 1972 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 GJA5P36382 358 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 HTR3AP46098 478 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RAB15P59190 212 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 RUNX2Q13950 521 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CYB561A3Q8NBI2 242 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF223Q9UK11 482 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-201ENST00000225964 B3GNT3Q9Y2A9 372 aa12.48□□□□□ -0.41
COL1A1-201ENST00000225964 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
COL1A1-201ENST00000225964 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms