RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 EIF2S3LQ2VIR3 472 aaKnown RBP17.84■□□□□ 0.45
SMPD3-201ENST00000219334 PNPLA1Q8N8W4 532 aa17.84■□□□□ 0.45
SMPD3-201ENST00000219334 NTMT1Q9BV86 223 aa17.84■□□□□ 0.45
SMPD3-201ENST00000219334 ACOT13Q9NPJ3 140 aa17.84■□□□□ 0.45
SMPD3-201ENST00000219334 UBQLN4Q9NRR5 601 aa17.84■□□□□ 0.45
SMPD3-201ENST00000219334 AOAHP28039 575 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 TMBIM6P55061 237 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 PIGFQ07326 219 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 OR5H2Q8NGV7 314 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 NETO1Q8TDF5 533 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 C22orf15Q8WYQ4 148 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 NMNAT1Q9HAN9 279 aaPredicted RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 PRSS21Q9Y6M0 314 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 G3V2L1 256 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 POLR2HP52434 150 aaKnown RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 MOGSQ13724 837 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 PPA1Q15181 289 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 SIX1Q15475 284 aaPredicted RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF791Q3KP31 576 aaPredicted RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 OR2A12Q8NGT7 310 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 COQ8AQ8NI60 647 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 SGCZQ96LD1 299 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 FER1L6-AS2Q96M78 137 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 OR4K3Q96R72 315 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 CNIH4Q9P003 139 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 RABL2AQ9UBK7 228 aaPredicted RBP17.83■□□□□ 0.45
SMPD3-201ENST00000219334 RABL2BQ9UNT1 228 aa17.83■□□□□ 0.45
SMPD3-201ENST00000219334 NARSO43776 548 aaKnown RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 KCNK5O95279 499 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 LCKP06239 509 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 RPS17P08708 135 aaKnown RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 CPMP14384 443 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 PCGF2P35227 344 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 TMEM151AQ8N4L1 468 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 CYB561A3Q8NBI2 242 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 OR5D16Q8NGK9 328 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 OR14A16Q8NHC5 309 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 TBC1D15Q8TC07 691 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 GSTO2Q9H4Y5 243 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 SDR39U1Q9NRG7 319 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 LHX3Q9UBR4 397 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 HS3ST2Q9Y278 367 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 C17orf113A0A1B0GUU1 675 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 OTOL1A6NHN0 477 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 H0YGG7 62 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 MAGEA3P43357 314 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 VEZF1Q14119 521 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF595Q8IYB9 648 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-201ENST00000219334 Q8N402 240 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF610Q8N9Z0 462 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 NPRL2Q8WTW4 380 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 CHPT1Q8WUD6 406 aa17.83■□□□□ 0.44
SMPD3-201ENST00000219334 C1SP09871 688 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 PSMB5P28074 263 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 SNTB2Q13425 540 aaKnown RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 MICAQ29983 383 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 IQCF1Q8N6M8 205 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 C19orf47Q8N9M1 422 aaKnown RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 MYLIPQ8WY64 445 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 BTBD2Q9BX70 525 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 AGAP5A6NIR3 686 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 KIAA0513O60268 411 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 ACTBP60709 375 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 ACTG1P63261 375 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TMEM236Q5W0B7 351 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TSPYL5Q86VY4 417 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 CPOQ8IVL8 374 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TDHQ8IZJ6 230 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 MMP21Q8N119 569 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 OR51T1Q8NGJ9 327 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TMEM168Q9H0V1 697 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 USP36Q9P275 1121 aaKnown RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 GLSO94925 669 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 DCDP81605 110 aaKnown RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 FCRLBQ6BAA4 426 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 OR51Q1Q8NH59 317 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 RSC1A1Q92681 617 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 OR51B6Q9H340 312 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 EVA1AQ9H8M9 152 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 NXT1Q9UKK6 140 aaKnown RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 MEN1O00255 615 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 RETP07949 1114 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 RGRP47804 291 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 PCBD1P61457 104 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 OR6Q1Q8NGQ2 317 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 OR5K2Q8NHB8 316 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 CD300LFQ8TDQ1 290 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 ASB11Q8WXH4 323 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 ZMYND19Q96E35 227 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TAS2R8Q9NYW2 309 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 ERVK-16P61578 105 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 RHEBQ15382 184 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 TXNDC15Q96J42 360 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 LMF1Q96S06 567 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 KCND3Q9UK17 655 aa17.82■□□□□ 0.44
SMPD3-201ENST00000219334 CDC14CA4D256 554 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 TSPAN4O14817 238 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms