RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PATL1Q86TB9 770 aaKnown RBP24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 VRK2Q86Y07 508 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 RTN4RQ9BZR6 473 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 DTNAQ9Y4J8 743 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 ITPR1Q14643 2758 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 ATMQ13315 3056 aa24.95■■□□□ 1.59
CHMP4B-201ENST00000217402 A0A0G2JMM0 328 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 A0A1W2PPB8 328 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 A0A1W2PRS3 328 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 C2orf72A6NCS6 295 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 KIR3DP1A8MWS1 328 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 M0QX08 132 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 PDE9AO76083 593 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 CD46P15529 392 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 IL7RP16871 459 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 RPS4Y1P22090 263 aaKnown RBP24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 GPR85P60893 370 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 BNIP2Q12982 314 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 KLHL26Q53HC5 615 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 GLYATQ6IB77 296 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 WDR60Q8WVS4 1066 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 PMM1Q92871 262 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 FAM162AQ96A26 154 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 TAMM41Q96BW9 452 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 OSBPL11Q9BXB4 747 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 MFRPQ9BY79 579 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 ADNPQ9H2P0 1102 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 SUCOQ9UBS9 1254 aaKnown RBP24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 SEC14L3Q9UDX4 400 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 MAGEL2Q9UJ55 1249 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 TUBD1Q9UJT1 453 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 SNX13Q9Y5W8 968 aa24.95■■□□□ 1.58
CHMP4B-201ENST00000217402 CLDN24A6NM45 220 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 C17orf51A8MQB3 221 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ALG1L2C9J202 215 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ARPC2O15144 300 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 GMNNO75496 209 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 DBIP07108 87 aaKnown RBP24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 KDELR2P33947 212 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 PTGDSP41222 190 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 CLK3P49761 638 aaKnown RBP24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 CRYBA2P53672 197 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 CD226Q15762 336 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 FXNQ16595 210 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ZNF766Q5HY98 468 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SLC25A25Q6KCM7 469 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 CCDC80Q76M96 950 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 PTRH1Q86Y79 214 aaKnown RBP24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ARMC8Q8IUR7 673 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SMYD1Q8NB12 490 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 RNF138Q8WVD3 245 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 DOHHQ9BU89 302 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ZNF443Q9Y2A4 671 aaPredicted RBP24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SERPINB7O75635 380 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SP1P08047 785 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 PABPC4LP0CB38 370 aaKnown RBP24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 DMTNQ08495 405 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 ZNF311Q5JNZ3 666 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SLC26A7Q8TE54 656 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SPATA5L1Q9BVQ7 753 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 DEPPQ9NTK1 212 aa24.94■■□□□ 1.58
CHMP4B-201ENST00000217402 SERINC4A6NH21 518 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 NDUFB5O43674 189 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 NME2P1O60361 137 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 MFN2O95140 757 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 ANGPTL1O95841 491 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 NME2P22392 152 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 DNASE1L1P49184 302 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 KCNJ2P63252 427 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 MS4A2Q01362 244 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 TRIM25Q14258 630 aaKnown RBP24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 LIN52Q52LA3 116 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 ZNF836Q6ZNA1 936 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 GALNTL5Q7Z4T8 443 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 RBMXL3Q8N7X1 1067 aaKnown RBP24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 EXD3Q8N9H8 876 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 PHOSPHO1Q8TCT1 267 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 ANGPTL4Q9BY76 406 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 MMADHCQ9H3L0 296 aaPredicted RBP24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 PROK2Q9HC23 129 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 SLC7A8Q9UHI5 535 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 IFT52Q9Y366 437 aa24.93■■□□□ 1.58
CHMP4B-201ENST00000217402 TRAV17A0A0B4J275 112 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 DPM1O60762 260 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 NID1P14543 1247 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 SNTA1Q13424 505 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 FGFBP1Q14512 234 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 LARS2Q15031 903 aaKnown RBP24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 TMEM81Q6P7N7 255 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 ASB9Q96DX5 294 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 SCMH1Q96GD3 660 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 ZNF232Q9UNY5 417 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 KLF13Q9Y2Y9 288 aaPredicted RBP24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 WIF1Q9Y5W5 379 aa24.92■■□□□ 1.58
CHMP4B-201ENST00000217402 A0A1W2PQD3 144 aa24.91■■□□□ 1.58
CHMP4B-201ENST00000217402 H3BNH8 94 aa24.91■■□□□ 1.58
CHMP4B-201ENST00000217402 ADAM10O14672 748 aa24.91■■□□□ 1.58
CHMP4B-201ENST00000217402 RRP9O43818 475 aaKnown RBP24.91■■□□□ 1.58
CHMP4B-201ENST00000217402 THBS1P07996 1170 aa24.91■■□□□ 1.58
CHMP4B-201ENST00000217402 GAS1P54826 345 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms