RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 RAF1P04049 648 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FGF4P08620 206 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 HOXB2P14652 356 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 RAB40BQ12829 278 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ACSM3Q53FZ2 586 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 VASNQ6EMK4 673 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 UNQ6126/PRO20091Q6UXV3 157 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FAM86B1Q8N7N1 296 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 LSMEM1Q8N8F7 131 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 OR56B2PQ8NGI1 322 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ADAMTS14Q8WXS8 1223 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SMOQ99835 787 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 URM1Q9BTM9 101 aaKnown RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 SLC19A3Q9BZV2 496 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PITHD1Q9GZP4 211 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 SAP130Q9H0E3 1048 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 MEPEQ9NQ76 525 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 GLOD5A6NK44 160 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 NPIPA5E9PKD4 350 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PSMB1P20618 241 aaKnown RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■■■■■ 33.5
VCL-201ENST00000211998 TAS2R31P59538 309 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 GPR85P60893 370 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PLEKHS1Q5SXH7 462 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 LIPJQ5W064 366 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 LCN10Q6JVE6 187 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 Q6ZPB1 254 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 NAGSQ8N159 534 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ZNF300Q96RE9 604 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 SCPEP1Q9HB40 452 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 LUZP4Q9P127 313 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 NPIPA1Q9UND3 350 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PRELID3BQ9Y3B1 194 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 A0A1B0GTW7 788 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 CPED1A4D0V7 1026 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 VSTM5A8MXK1 200 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 MAFKO60675 156 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FZD7O75084 574 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 RDH16O75452 317 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FGF18O76093 207 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 YIF1BQ5BJH7 314 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SLX4IPQ5VYV7 408 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 KCTD18Q6PI47 426 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 TMUB2Q71RG4 321 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 NAA40Q86UY6 237 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 KDM8Q8N371 416 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 OR52P1PQ8NH57 321 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ZNF384Q8TF68 577 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 MOAP1Q96BY2 351 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SLC25A18Q9H1K4 315 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ACTL8Q9H568 366 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ZFP57Q9NU63 452 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 A3GALT2U3KPV4 340 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PIK3C2AO00443 1686 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 ZCWPW2A0A1B0GU75 182 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 LEFTY2O00292 366 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 SCAMP2O15127 329 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 TNFSF12O43508 249 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 KLK3P07288 261 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 CTHP32929 405 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 LIPAP38571 399 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 COTL1Q14019 142 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TEAD2Q15562 447 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 RNF212Q495C1 297 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TTLL10Q6ZVT0 673 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 GAREM2Q75VX8 874 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 GPAT4Q86UL3 456 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 CPOQ8IVL8 374 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 CMTM8Q8IZV2 173 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR13C3Q8NGS6 347 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 MRGPRX2Q96LB1 330 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 FBXO8Q9NRD0 319 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PSORS1C1Q9UIG5 152 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 UBE2J1Q9Y385 318 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 PCDHGA2Q9Y5H1 932 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 GABRPO00591 440 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 KCNJ13O60928 360 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PNPP00491 289 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 VEGFCP49767 419 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 MEF2AQ02078 507 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 RGNQ15493 299 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TP53I3Q53FA7 332 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PDZD11Q5EBL8 140 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 CD276Q5ZPR3 534 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 WDTC1Q8N5D0 677 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR1M1Q8NGA1 313 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR9A1PQ8NGU1 263 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR5AK2Q8NH90 309 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 MYEF2Q9P2K5 600 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 GNG13Q9P2W3 67 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 D6RAR5 112 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TNFRSF10BO14763 440 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms