RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 GPER1Q99527 375 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 RPP25Q9BUL9 199 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 MRPS30Q9NP92 439 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 FAM186AA6NE01 2351 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 A0A1W2PP55 124 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 NPIPB15A6NHN6 443 aaPredicted RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SLC22A31A6NKX4 558 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 M0R082 166 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 CACNB4O00305 520 aaPredicted RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 TAPBPO15533 448 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 INHBBP09529 407 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 CSF3P09919 207 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 ACP5P13686 325 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 IDSP22304 550 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 HTR2AP28223 471 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 HOXD9P28356 352 aaPredicted RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 STXBP1P61764 594 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 LMAN2Q12907 356 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 AIMP2Q13155 320 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SMAD4Q13485 552 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 TOR2AQ5JU69 321 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 JAGN1Q8N5M9 183 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 RBPMSQ93062 196 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF285Q96NJ3 590 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 GSX2Q9BZM3 304 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 ATP13A2Q9NQ11 1180 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 C14orf105Q9NVL8 296 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SCP2D1Q9UJQ7 156 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 PADI2Q9Y2J8 665 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 LRRTM2O43300 516 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 AHRP35869 848 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 MMP12P39900 470 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 YBX1P67809 324 aaKnown RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 ID2Q02363 134 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SMUG1Q53HV7 270 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 METAP1DQ6UB28 335 aaPredicted RBP10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 TMC8Q8IU68 726 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF248Q8NDW4 579 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 OR8J2Q8NGG1 315 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SUN3Q8TAQ9 357 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 EGLN3Q9H6Z9 239 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 PLCXD1Q9NUJ7 323 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 KLHL9Q9P2J3 617 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 RCE1Q9Y256 329 aa10.86□□□□□ -0.67
DNMT3B-201ENST00000201963 A0A0G2JMP0 313 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 PIP5K1CO60331 668 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF30P17039 623 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 AHCYP23526 432 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 CMPK1P30085 196 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 GRPRP30550 384 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 CD70P32970 193 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 FXYD6P3P58550 94 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 KIAA1024LP59773 190 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 METTL2BQ6P1Q9 378 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 QSOX2Q6ZRP7 698 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 FBXO15Q8NCQ5 510 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 VN1R2Q8NFZ6 395 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 OR4M2Q8NGB6 313 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SETD7Q8WTS6 366 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 THEM6Q8WUY1 208 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 FGF14Q92915 247 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 GLYATL1Q969I3 302 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 AHCYL2Q96HN2 611 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 OR2A14Q96R47 310 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 DPEP2Q9H4A9 486 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ERVK-19Q9WJR5 959 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SIT1Q9Y3P8 196 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 FARS2O95363 451 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 IGFBP1P08833 259 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 PCMT1P22061 227 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 GABRA5P31644 462 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 TRAM1Q15629 374 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ACSM3Q53FZ2 586 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF362Q5T0B9 420 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 LRIF1Q5T3J3 769 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 EIF5AL1Q6IS14 154 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 GRAMD2AQ8IUY3 354 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 TMEM185AQ8NFB2 350 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SLC25A46Q96AG3 418 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SRRQ9GZT4 340 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 PHPT1Q9NRX4 125 aaPredicted RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 TCRBP04435 133 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ARAFP10398 606 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ACP2P11117 423 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 SPINT3P49223 89 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 BTN3A2P78410 334 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 CRYZQ08257 329 aaKnown RBP10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 FCRLBQ6BAA4 426 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 TMEM107Q6UX40 140 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 UNC5DQ6UXZ4 953 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 KANSL1Q7Z3B3 1105 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 CCDC190Q86UF4 302 aa10.85□□□□□ -0.67
DNMT3B-201ENST00000201963 ZNF227Q86WZ6 799 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms