RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 BCL2L10Q9HD36 194 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 PIAS3Q9Y6X2 628 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 DVL2O14641 736 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 CTSBP07858 339 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 PRKCAP17252 672 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TYRP1P17643 537 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TPMTP51580 245 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 FABP5Q01469 135 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 DUSP5Q16690 384 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 DEFB110Q30KQ9 67 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TRIQKQ629K1 86 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 C1orf94Q6P1W5 598 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TMEM64Q6YI46 380 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 PLEKHM3Q6ZWE6 761 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 NRMQ8IXM6 262 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 YIPF7Q8N8F6 280 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 OR4F15Q8NGB8 312 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TEX47Q8TBZ9 253 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 GIMAP5Q96F15 307 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 MCHR1Q99705 422 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 IRF2BPLQ9H1B7 796 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 ZSCAN32Q9NX65 697 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 NPAP1Q9NZP6 1156 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 MAU2Q9Y6X3 613 aa12.25□□□□□ -0.45
CTNS-201ENST00000046640 TCRBV21S2A2A0A5A6 115 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CD8B2A6NJW9 211 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 HCRTR1O43613 425 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SLC2A10O95528 541 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CD8BP10966 210 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SLC2A2P11168 524 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 PRG2P13727 222 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 TEAD1P28347 426 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 LSSP48449 732 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ANXA11P50995 505 aaKnown RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 GALK2Q01415 458 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 TATDN3Q17R31 274 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.24□□□□□ -0.45
CTNS-201ENST00000046640 MEDAGQ5VYS4 303 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CNIH2Q6PI25 160 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 FIGLAQ6QHK4 219 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 PLET1Q6UQ28 207 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 Q6ZSR6 202 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 LRRC25Q8N386 305 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 VWA5B2Q8N398 1253 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 Q8N402 240 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 TMEM52Q8NDY8 209 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 NACC2Q96BF6 587 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 C10orf90Q96M02 699 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 OR2A5Q96R48 311 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 PINK1Q9BXM7 581 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ACTRT3Q9BYD9 372 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 HEBP2Q9Y5Z4 205 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 TICRRQ7Z2Z1 1910 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 FAM183AA6NL82 134 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CENPBD1B2RD01 187 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 HYAL3O43820 417 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 LALBAP00709 142 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 THY1P04216 161 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 HTR2BP41595 481 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 INPP1P49441 399 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SRP54P61011 504 aaKnown RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 EXOSC7Q15024 291 aaKnown RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 ALG11Q2TAA5 492 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZNF791Q3KP31 576 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 SLC35F1Q5T1Q4 408 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 FCRL6Q6DN72 434 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 FIGNL1Q6PIW4 674 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 XKRXQ6PP77 449 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 OR4K14Q8NGD5 310 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 FAM3CQ92520 227 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 GAL3ST3Q96A11 431 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 MCOLN1Q9GZU1 580 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 KLF15Q9UIH9 416 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CLCA2Q9UQC9 943 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 WDR45Q9Y484 360 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 OR2W5A6NFC9 320 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 POLR1CO15160 346 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 YES1P07947 543 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CELP19835 753 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ATP6V1E1P36543 226 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SLC9A3P48764 834 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 WNT4P56705 351 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 RPS15AP62244 130 aaKnown RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 GNA13Q14344 377 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZNF57Q68EA5 555 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 MFSD12Q6NUT3 480 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SMARCD3Q6STE5 483 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZNF614Q8N883 585 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SFXN5Q8TD22 340 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZFPM2Q8WW38 1151 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ZNF764Q96H86 408 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 GAS2L1Q99501 681 aaPredicted RBP12.24□□□□□ -0.45
CTNS-201ENST00000046640 WACQ9BTA9 647 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 ACTR10Q9NZ32 417 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 KCMF1Q9P0J7 381 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 SLC7A7Q9UM01 511 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 CSNK1G3Q9Y6M4 447 aa12.24□□□□□ -0.45
CTNS-201ENST00000046640 IQCMA0A1B0GVH7 501 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms