RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 NLKQ9UBE8 527 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHPF2-201ENST00000035307 PPP1R3DO95685 299 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 HLA-DPB1P04440 258 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 IDUAP35475 653 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 SNRPD2P62316 118 aaKnown RBP11.29□□□□□ -0.6
CHPF2-201ENST00000035307 BCL7AQ4VC05 210 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 MCATQ8IVS2 390 aaKnown RBP11.29□□□□□ -0.6
CHPF2-201ENST00000035307 CHTF18Q8WVB6 975 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 CDADC1Q9BWV3 514 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 EYSQ5T1H1 3165 aa11.29□□□□□ -0.6
CHPF2-201ENST00000035307 IGLV3-16A0A075B6K0 115 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 DHFRP00374 187 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 CDK1P06493 297 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 CLEC2LP0C7M8 214 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 MAN2A2P49641 1150 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 GP2P55259 537 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SQSTM1Q13501 440 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PLAG1Q6DJT9 500 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 UBTD2Q8WUN7 234 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 TM4SF18Q96CE8 201 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SLC41A3Q96GZ6 507 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SAP130Q9H0E3 1048 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 DDX31Q9H8H2 851 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 NECTIN3Q9NQS3 549 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 TMEM184CQ9NVA4 438 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 FAIMQ9NVQ4 179 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 YARS2Q9Y2Z4 477 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PATE3B3GLJ2 98 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 RCBTB2O95199 551 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 ABATP80404 500 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 KEAP1Q14145 624 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PUM1Q14671 1186 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PON3Q15166 354 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 BORAQ6PGQ7 559 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 DNAJC22Q8N4W6 341 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 DENND6BQ8NEG7 585 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SMAP2Q8WU79 429 aaPredicted RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 ADAD1Q96M93 576 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 C1QTNF3Q9BXJ4 246 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 NRSN2Q9GZP1 204 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 TAS2R7Q9NYW3 318 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 OR6C2Q9NZP2 312 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 MYEF2Q9P2K5 600 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 CMAHPQ9Y471 501 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PCDHGB6Q9Y5F9 930 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PAPLNO95428 1278 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PCSK2P16519 638 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 GIPRP48546 466 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PPP5CP53041 499 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 AQP6Q13520 282 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 GGTA1PQ4G0N0 100 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 OR2L5Q8NG80 312 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 SLC7A13Q8TCU3 470 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 OSTF1Q92882 214 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 MUL1Q969V5 352 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 OR7D2Q96RA2 312 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 EPYCQ99645 322 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 GAREM1Q9H706 876 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 TCF7L1Q9HCS4 588 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
CHPF2-201ENST00000035307 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
CHPF2-201ENST00000035307 IGHV3-20A0A0C4DH32 117 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 AP1G1O43747 822 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 KLHL18O94889 574 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 F10P00742 488 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 ANXA2P07355 339 aaKnown RBP11.27□□□□□ -0.6
CHPF2-201ENST00000035307 ADH7P40394 386 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 MNDAP41218 407 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 XCR1P46094 333 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 Q8N402 240 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 YIPF7Q8N8F6 280 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.6
CHPF2-201ENST00000035307 OR6N2Q8NGY6 317 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 GNPDA2Q8TDQ7 276 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.6
CHPF2-201ENST00000035307 TEX101Q9BY14 249 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 TP63Q9H3D4 680 aaPredicted RBP11.27□□□□□ -0.6
CHPF2-201ENST00000035307 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 COL6A6A6NMZ7 2263 aa11.27□□□□□ -0.6
CHPF2-201ENST00000035307 A0A1W2PPC4 97 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 IRGMA1A4Y4 181 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 ARHGAP33O14559 1287 aa11.27□□□□□ -0.61
CHPF2-201ENST00000035307 DRD2P14416 443 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms