RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 MARCH10Q8NA82 808 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR2T35Q8NGX2 323 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SGTBQ96EQ0 304 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR2M4Q96R27 311 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 KCNJ15Q99712 375 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM246Q9BRR3 403 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 EBPLQ9BY08 206 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CNTNAP3Q9BZ76 1288 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PNO1Q9NRX1 252 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 DMAC2Q9NW81 257 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 BTNL2Q9UIR0 455 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ROS1P08922 2347 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 A0A0A6YYH2 397 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 A6NJ64 397 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LRRC30A6NM36 301 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TACR1P25103 407 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SSX2Q16385 188 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LIPKQ5VXJ0 399 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 BEND4Q6ZU67 534 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ASPGQ86U10 573 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF100Q8IYN0 542 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SLC30A7Q8NEW0 376 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 DPH7Q9BTV6 452 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 C8orf33Q9H7E9 229 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MOB1AQ9H8S9 216 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SH3BGRLO75368 114 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RAF1P04049 648 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 FOSL2P15408 326 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RPS15P62841 145 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CTSL3PQ5NE16 218 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF678Q5SXM1 525 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ENPP6Q6UWR7 440 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NAA40Q86UY6 237 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 KCT2Q8NC54 265 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PGAM5Q96HS1 289 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 WRAP53Q9BUR4 548 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PELI2Q9HAT8 420 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CENPMQ9NSP4 180 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PLCXD1Q9NUJ7 323 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NXT1Q9UKK6 140 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 POMT1Q9Y6A1 747 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 B4DXG7 233 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ASGR2P07307 311 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CLCNKBP51801 687 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 EFNA3P52797 238 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PLGLAQ15195 96 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 P2RY14Q15391 338 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 BRICD5Q6PL45 260 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RNF111Q6ZNA4 994 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 GOLGA7Q7Z5G4 137 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PRRT2Q7Z6L0 340 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM139Q8IV31 216 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TEX29Q8N6K0 151 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 RTP4Q96DX8 246 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SLC6A7Q99884 636 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR51I1Q9H343 314 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SDR39U1Q9NRG7 319 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 OR6C2Q9NZP2 312 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ERVK-18Q9QC07 812 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NLKQ9UBE8 527 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PADI3Q9ULW8 664 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 DLGAP4Q9Y2H0 992 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 E9PI62 339 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 KIAA0513O60268 411 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PRAMEF11O60813 436 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 UBL3O95164 117 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MT-ND4LP03901 98 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 KLK1P06870 262 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CDK4P11802 303 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CD53P19397 219 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SLC25A11Q02978 314 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 EIF2B1Q14232 305 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PKDCCQ504Y2 493 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 C6orf183Q5T699 404 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PPP2R2DQ66LE6 453 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ANKRD54Q6NXT1 300 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 XKR5Q6UX68 686 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 PDZD3Q86UT5 571 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 GLB1L2Q8IW92 636 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CBARPQ8N350 705 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 FBXO15Q8NCQ5 510 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NFKBIDQ8NI38 313 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NKX3-1Q99801 234 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MKRN2Q9H000 416 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 SLC6A17Q9H1V8 727 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF442Q9H7R0 627 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM181Q9P2C4 612 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 MUTYHQ9UIF7 546 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 ENPP5Q9UJA9 477 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TAF1P21675 1872 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 C2orf92A0A1B0GVN3 265 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 A0A1W2PPM1 405 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 EEF1E1O43324 174 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 C8AP07357 584 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A6P0DMU7 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A5P0DMU8 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A7P0DMV0 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A8P0DMV1 189 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CT45A9P0DMV2 189 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms