RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Q8BPC6 396 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 ExogQ8C163 368 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sf3b4Q8QZY9 424 aaKnown RBP15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Eml3Q8VC03 897 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fer1l6E0CZ42 1862 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Abca7Q91V24 2159 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm3543D3Z235 184 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 OgdhlE9Q7L0 1029 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 JrkQ60976 557 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fzd3Q61086 666 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc30a8Q8BGG0 367 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr52Q8VFL0 319 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Steap1Q9CWR7 339 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tor3aQ9ER38 385 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Capn15Q9JLG8 1095 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cytl1A1E5L0 139 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Apex1P28352 317 aaKnown RBP15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 P58686 83 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vwa2Q70UZ7 791 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sidt2Q8CIF6 832 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr380Q8VGT3 311 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cxxc1Q9CWW7 660 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 1700028J19RikA0A0U1RP08 172 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr893K7N678 312 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 GzmeP08884 248 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fbxo31Q3TQF0 507 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Entpd6Q3U0P5 455 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rslcan18Q7M6X5 460 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 HpgdsQ9JHF7 199 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 TfecQ9WTW4 317 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Auts2A0A087WPF7 1261 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 CatsperbA2RTF1 1109 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cd83O88324 196 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc6a18O88576 615 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 BmxP97504 651 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Crtc2Q3U182 692 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sim1Q61045 765 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1126Q7TR49 314 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Amer2Q8CCJ4 672 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tmprss11dQ8VHK8 417 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PtprvP70289 1705 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cnih2O35089 160 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 GlaP51569 419 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ebf1Q07802 591 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gpr160Q3U3F9 336 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kiss1Q6Y4S4 130 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kremen2Q8K1S7 461 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr691Q8VGW5 322 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fn3kQ9ER35 309 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tmsb15aA2AEH9 79 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm4846B2RWH8 538 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 LpoQ5SW46 710 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SprQ64105 261 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Poc1bQ8BHD1 476 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tbl1xr1Q8BHJ5 514 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ankmy1Q8C0W1 906 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mettl18Q9CZ09 362 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Smco4Q9JIS3 59 aa15.77■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr652B9EHE6 318 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 4930523C07RikE9Q2T4 99 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gm17535J3KMR8 224 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr237-ps1K9J725 310 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Clec10aP49300 304 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Hs6st2Q80UW0 612 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Ston2Q8BZ60 895 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Lrr1D3YY91 422 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 PtprhE9Q0N2 971 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Gal3st4Q3V1B8 480 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Znf354cQ571J5 560 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Shc4Q6S5L9 626 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Stk-ps2Q8C0V7 499 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Nkd2Q8VE28 461 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn1r69Q8VIC1 319 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Tmigd1Q9D7L8 261 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1150-ps1A0A1L1STL1 316 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Slc5a10Q5SWY8 596 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr320Q7TRZ4 306 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Actbl2Q8BFZ3 376 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Unc119bQ8C4B4 251 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Defb19Q8K3I8 83 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Uhrf1Q8VDF2 782 aaKnown RBP15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr283Q8VGU2 309 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Prss16Q9QXE5 509 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 UgdhO70475 493 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 SobpQ0P5V2 864 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 4933415F23RikQ14BX6 153 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Zfp184Q7TSH9 737 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Plag1Q9QYE0 499 aa15.77■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 CryaaP24622 196 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr688Q6W049 321 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Znf750Q8BH05 703 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Fjx1Q8BQB4 450 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr1461Q8VEV7 312 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Olfr998Q8VF76 314 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Bcl7aQ9CXE2 210 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Vmn2r124K7N789 855 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Uap1l1Q3TW96 507 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dyrk2Q5U4C9 599 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Jagn1Q5XKN4 183 aa15.76■□□□□ 0.11
Ccdc88a-201ENSMUST00000040182 Dnajc27Q8CFP6 273 aa15.76■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms