RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-221ENST00000641573 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
PHGDH-221ENST00000641573 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
PHGDH-221ENST00000641573 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
PHGDH-221ENST00000641573 MYD88Q99836 296 aa16.38■□□□□ 0.21
PHGDH-221ENST00000641573 HTRA3P83110 453 aa16.37■□□□□ 0.21
PHGDH-221ENST00000641573 FSTL1Q12841 308 aa16.37■□□□□ 0.21
PHGDH-221ENST00000641573 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
PHGDH-221ENST00000641573 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
PHGDH-221ENST00000641573 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
PHGDH-221ENST00000641573 TJP1Q07157 1748 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 MMP10P09238 476 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 RGS3P49796 1198 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 SIK1P57059 783 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 TGFB2P61812 414 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 GCC1Q96CN9 775 aa16.36■□□□□ 0.21
PHGDH-221ENST00000641573 GNPATO15228 680 aa16.35■□□□□ 0.21
PHGDH-221ENST00000641573 HMMRO75330 724 aa16.35■□□□□ 0.21
PHGDH-221ENST00000641573 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-221ENST00000641573 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-221ENST00000641573 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-221ENST00000641573 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
PHGDH-221ENST00000641573 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
PHGDH-221ENST00000641573 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
PHGDH-221ENST00000641573 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-221ENST00000641573 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 GRM8O00222 908 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 NUCB1Q02818 461 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 ITPK1Q13572 414 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 UTYO14607 1347 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
PHGDH-221ENST00000641573 GCKRQ14397 625 aa16.32■□□□□ 0.2
PHGDH-221ENST00000641573 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
PHGDH-221ENST00000641573 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
PHGDH-221ENST00000641573 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-221ENST00000641573 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
PHGDH-221ENST00000641573 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-221ENST00000641573 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
PHGDH-221ENST00000641573 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
PHGDH-221ENST00000641573 CCDC87Q9NVE4 849 aa16.31■□□□□ 0.2
PHGDH-221ENST00000641573 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
PHGDH-221ENST00000641573 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
PHGDH-221ENST00000641573 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
PHGDH-221ENST00000641573 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
PHGDH-221ENST00000641573 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
PHGDH-221ENST00000641573 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
PHGDH-221ENST00000641573 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 KIAA1551Q9HCM1 1747 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 DPEP1P16444 411 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 PDE4AP27815 886 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
PHGDH-221ENST00000641573 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
PHGDH-221ENST00000641573 NPM2Q86SE8 214 aaKnown RBP16.28■□□□□ 0.2
PHGDH-221ENST00000641573 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
PHGDH-221ENST00000641573 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
PHGDH-221ENST00000641573 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-221ENST00000641573 PCNTO95613 3336 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.2
PHGDH-221ENST00000641573 POLA2Q14181 598 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 RRAGCQ9HB90 399 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
PHGDH-221ENST00000641573 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.2
PHGDH-221ENST00000641573 MYH14Q7Z406 1995 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 A0A087WZG4 1122 aa16.26■□□□□ 0.19
PHGDH-221ENST00000641573 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
PHGDH-221ENST00000641573 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 MTX1Q13505 466 aa16.26■□□□□ 0.19
PHGDH-221ENST00000641573 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
PHGDH-221ENST00000641573 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
PHGDH-221ENST00000641573 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
PHGDH-221ENST00000641573 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
PHGDH-221ENST00000641573 ERVV-1B6SEH8 477 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 H7C1W4 665 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 HLFQ16534 295 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
PHGDH-221ENST00000641573 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-221ENST00000641573 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
PHGDH-221ENST00000641573 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
PHGDH-221ENST00000641573 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms