RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
PHGDH-217ENST00000641455 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
PHGDH-217ENST00000641455 HUNKP57058 714 aa10.61□□□□□ -0.71
PHGDH-217ENST00000641455 POTEDQ86YR6 584 aa10.61□□□□□ -0.71
PHGDH-217ENST00000641455 RPGRQ92834 1020 aaKnown RBP10.61□□□□□ -0.71
PHGDH-217ENST00000641455 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
PHGDH-217ENST00000641455 GPRC5DQ9NZD1 345 aa10.61□□□□□ -0.71
PHGDH-217ENST00000641455 GNAT3A8MTJ3 354 aa10.6□□□□□ -0.71
PHGDH-217ENST00000641455 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 BTBD11A6QL63 1104 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 KCNQ3O43525 872 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 GMPSP49915 693 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-217ENST00000641455 AOC3Q16853 763 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 IL17REQ8NFR9 667 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-217ENST00000641455 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 USP16Q9Y5T5 823 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
PHGDH-217ENST00000641455 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-217ENST00000641455 NPC1L1Q9UHC9 1359 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-217ENST00000641455 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
PHGDH-217ENST00000641455 TRPA1O75762 1119 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 CDC37L1Q7L3B6 337 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 NYXQ9GZU5 481 aa10.58□□□□□ -0.72
PHGDH-217ENST00000641455 KIF23Q02241 960 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-217ENST00000641455 CXCL9Q07325 125 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 RGMBQ6NW40 437 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 CTU1Q7Z7A3 348 aaKnown RBP10.57□□□□□ -0.72
PHGDH-217ENST00000641455 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 SLC51AQ86UW1 340 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 GCC1Q96CN9 775 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
PHGDH-217ENST00000641455 SAGE1Q9NXZ1 904 aa10.57□□□□□ -0.72
PHGDH-217ENST00000641455 AKAP11Q9UKA4 1901 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
PHGDH-217ENST00000641455 HLFQ16534 295 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 TRPM4Q8TD43 1214 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
PHGDH-217ENST00000641455 RNF186Q9NXI6 227 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 ZNRF3Q9ULT6 936 aa10.56□□□□□ -0.72
PHGDH-217ENST00000641455 RAD17O75943 681 aa10.55□□□□□ -0.72
PHGDH-217ENST00000641455 SNRPA1P09661 255 aaKnown RBP10.55□□□□□ -0.72
PHGDH-217ENST00000641455 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-217ENST00000641455 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
PHGDH-217ENST00000641455 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
PHGDH-217ENST00000641455 GBA2Q9HCG7 927 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-217ENST00000641455 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
PHGDH-217ENST00000641455 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-217ENST00000641455 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 H7C1D1 291 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 RGL2O15211 777 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 GPTP24298 496 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-217ENST00000641455 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-217ENST00000641455 TNIP1Q15025 636 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
PHGDH-217ENST00000641455 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 SUPT20HQ8NEM7 779 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 HDAC9Q9UKV0 1011 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 CDHR2Q9BYE9 1310 aa10.54□□□□□ -0.72
PHGDH-217ENST00000641455 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
PHGDH-217ENST00000641455 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
PHGDH-217ENST00000641455 KRT26Q7Z3Y9 468 aa10.53□□□□□ -0.72
PHGDH-217ENST00000641455 CNOT7Q9UIV1 285 aaKnown RBP10.53□□□□□ -0.72
PHGDH-217ENST00000641455 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
PHGDH-217ENST00000641455 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
PHGDH-217ENST00000641455 HABP4Q5JVS0 413 aaKnown RBP10.52□□□□□ -0.73
PHGDH-217ENST00000641455 DPP8Q6V1X1 898 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-217ENST00000641455 KIF6Q6ZMV9 814 aa10.52□□□□□ -0.73
PHGDH-217ENST00000641455 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
PHGDH-217ENST00000641455 VPS33BQ9H267 617 aa10.52□□□□□ -0.73
PHGDH-217ENST00000641455 ADM5C9JUS6 153 aa10.51□□□□□ -0.73
PHGDH-217ENST00000641455 EIF4G2P78344 907 aaKnown RBP eCLIP10.51□□□□□ -0.73
PHGDH-217ENST00000641455 TBC1D10BQ4KMP7 808 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-217ENST00000641455 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
PHGDH-217ENST00000641455 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
PHGDH-217ENST00000641455 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
PHGDH-217ENST00000641455 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
PHGDH-217ENST00000641455 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
PHGDH-217ENST00000641455 NUP98P52948 1817 aa10.51□□□□□ -0.73
PHGDH-217ENST00000641455 POLR2AP24928 1970 aaKnown RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 SLC10A3P09131 477 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 HSPA5P11021 654 aaKnown RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 CNGB1Q14028 1251 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 PKN2Q16513 984 aaKnown RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 AMER1Q5JTC6 1135 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 SUSD4Q5VX71 490 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms