RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 TMTC2Q8N394 836 aa9.51□□□□□ -0.89
RTTN-223ENST00000640931 ZNF335Q9H4Z2 1342 aaPredicted RBP9.5□□□□□ -0.89
RTTN-223ENST00000640931 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 CTAGE5O15320 804 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 IPO8O15397 1037 aaKnown RBP9.5□□□□□ -0.89
RTTN-223ENST00000640931 ATF3P18847 181 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 EVX2Q03828 476 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 MPRIPQ6WCQ1 1025 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 KRT222Q8N1A0 295 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
RTTN-223ENST00000640931 RWDD1Q9H446 243 aaPredicted RBP9.5□□□□□ -0.89
RTTN-223ENST00000640931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.89
RTTN-223ENST00000640931 RGS12O14924 1447 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 MST1RQ04912 1400 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 HNRNPH2P55795 449 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 HSP90AB4PQ58FF6 505 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 ZC3H12AQ5D1E8 599 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 MKL1Q969V6 931 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 ZNF428Q96B54 188 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 GBP4Q96PP9 640 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 DIAPH3Q9NSV4 1193 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 CTNNA3Q9UI47 895 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 JRKLQ9Y4A0 524 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 ABCC4O15439 1325 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 CTIFO43310 598 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 CYP2C19P33261 490 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 BIRC2Q13490 618 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 DNAJC21Q5F1R6 531 aaKnown RBP9.49□□□□□ -0.89
RTTN-223ENST00000640931 RINLQ6ZS11 566 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 DEF6Q9H4E7 631 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 PXDNQ92626 1479 aa9.49□□□□□ -0.89
RTTN-223ENST00000640931 ANXA1P04083 346 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 ATP2B1P20020 1258 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 CHAF1AQ13111 956 aaPredicted RBP9.48□□□□□ -0.89
RTTN-223ENST00000640931 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
RTTN-223ENST00000640931 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 PAXBP1Q9Y5B6 917 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 TRPM3Q9HCF6 1732 aaPredicted RBP9.48□□□□□ -0.89
RTTN-223ENST00000640931 MAP3K5Q99683 1374 aa9.48□□□□□ -0.89
RTTN-223ENST00000640931 CCDC196A0A1B0GTZ2 297 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 PRAMEF22A3QJZ6 481 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 ERICH4A6NGS2 130 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 ATP6V1AP38606 617 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 ZNF445P59923 1031 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 SLC4A10Q6U841 1118 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 TSC1Q92574 1164 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
RTTN-223ENST00000640931 TBC1D22AQ8WUA7 517 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 MEIS3Q99687 375 aa9.47□□□□□ -0.89
RTTN-223ENST00000640931 RGS17Q9UGC6 210 aaPredicted RBP9.47□□□□□ -0.89
RTTN-223ENST00000640931 RGPD5Q99666 1765 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 A0A1B0GUL7 405 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 APBB1O00213 710 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 COQ9O75208 318 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 EIF2S2P20042 333 aaKnown RBP9.46□□□□□ -0.89
RTTN-223ENST00000640931 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.89
RTTN-223ENST00000640931 TRERF1Q96PN7 1200 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 TMX1Q9H3N1 280 aa9.46□□□□□ -0.89
RTTN-223ENST00000640931 PHAXQ9H814 394 aaKnown RBP9.46□□□□□ -0.89
RTTN-223ENST00000640931 H0YHG0 523 aa9.46□□□□□ -0.9
RTTN-223ENST00000640931 IPO7O95373 1038 aaKnown RBP9.46□□□□□ -0.9
RTTN-223ENST00000640931 SARNPP82979 210 aaKnown RBP9.46□□□□□ -0.9
RTTN-223ENST00000640931 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
RTTN-223ENST00000640931 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
RTTN-223ENST00000640931 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
RTTN-223ENST00000640931 TOMM22Q9NS69 142 aa9.46□□□□□ -0.9
RTTN-223ENST00000640931 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
RTTN-223ENST00000640931 SLIT3O75094 1523 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 RTL1A6NKG5 1358 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 NEFHP12036 1026 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
RTTN-223ENST00000640931 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 SUGP1Q8IWZ8 645 aaKnown RBP9.45□□□□□ -0.9
RTTN-223ENST00000640931 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 ARHGAP45Q92619 1136 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 KIAA0232Q92628 1395 aa9.45□□□□□ -0.9
RTTN-223ENST00000640931 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 NOM1Q5C9Z4 860 aaKnown RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 OTUD7AQ8TE49 926 aaPredicted RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 FAM53CQ9NYF3 392 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 TNNT1P13805 278 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 MAP9Q49MG5 647 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 TSPAN18Q96SJ8 248 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 NUCKS1Q9H1E3 243 aaKnown RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 XIRP1Q702N8 1843 aaKnown RBP9.44□□□□□ -0.9
RTTN-223ENST00000640931 KIF24Q5T7B8 1368 aa9.44□□□□□ -0.9
RTTN-223ENST00000640931 NCOA3Q9Y6Q9 1424 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms