RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
SCARB2-226ENST00000640916 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
SCARB2-226ENST00000640916 SETDB2Q96T68 719 aa11.19□□□□□ -0.62
SCARB2-226ENST00000640916 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
SCARB2-226ENST00000640916 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
SCARB2-226ENST00000640916 NPR1P16066 1061 aa11.17□□□□□ -0.62
SCARB2-226ENST00000640916 ST5P78524 1137 aa11.17□□□□□ -0.62
SCARB2-226ENST00000640916 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
SCARB2-226ENST00000640916 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-226ENST00000640916 GJA3Q9Y6H8 435 aa11.17□□□□□ -0.62
SCARB2-226ENST00000640916 SIPA1L3O60292 1781 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-226ENST00000640916 STARD3NLO95772 234 aa11.16□□□□□ -0.62
SCARB2-226ENST00000640916 IL13P35225 146 aa11.16□□□□□ -0.62
SCARB2-226ENST00000640916 IL6STP40189 918 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-226ENST00000640916 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-226ENST00000640916 PSMD1Q99460 953 aa11.16□□□□□ -0.62
SCARB2-226ENST00000640916 CELF2O95319 508 aaKnown RBP11.15□□□□□ -0.62
SCARB2-226ENST00000640916 A1BGP04217 495 aa11.15□□□□□ -0.62
SCARB2-226ENST00000640916 SLC51AQ86UW1 340 aa11.15□□□□□ -0.62
SCARB2-226ENST00000640916 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
SCARB2-226ENST00000640916 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
SCARB2-226ENST00000640916 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
SCARB2-226ENST00000640916 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
SCARB2-226ENST00000640916 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-226ENST00000640916 POTEHQ6S545 545 aa11.14□□□□□ -0.63
SCARB2-226ENST00000640916 GLIS2Q9BZE0 524 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-226ENST00000640916 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
SCARB2-226ENST00000640916 FAM155AB1AL88 458 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-226ENST00000640916 EIF6P56537 245 aaKnown RBP11.13□□□□□ -0.63
SCARB2-226ENST00000640916 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
SCARB2-226ENST00000640916 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
SCARB2-226ENST00000640916 JDP2Q8WYK2 163 aa11.13□□□□□ -0.63
SCARB2-226ENST00000640916 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-226ENST00000640916 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
SCARB2-226ENST00000640916 NPHP1O15259 732 aa11.12□□□□□ -0.63
SCARB2-226ENST00000640916 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-226ENST00000640916 NOGQ13253 232 aa11.12□□□□□ -0.63
SCARB2-226ENST00000640916 NBPF5PQ86XG9 351 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-226ENST00000640916 DZIP3Q86Y13 1208 aaKnown RBP11.12□□□□□ -0.63
SCARB2-226ENST00000640916 ADARB2Q9NS39 739 aaKnown RBP11.12□□□□□ -0.63
SCARB2-226ENST00000640916 GPRC5DQ9NZD1 345 aa11.12□□□□□ -0.63
SCARB2-226ENST00000640916 HABP4Q5JVS0 413 aaKnown RBP11.11□□□□□ -0.63
SCARB2-226ENST00000640916 ZNF790Q6PG37 636 aa11.11□□□□□ -0.63
SCARB2-226ENST00000640916 CLEC4GQ6UXB4 293 aa11.11□□□□□ -0.63
SCARB2-226ENST00000640916 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
SCARB2-226ENST00000640916 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-226ENST00000640916 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
SCARB2-226ENST00000640916 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
SCARB2-226ENST00000640916 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-226ENST00000640916 CRY2Q49AN0 593 aa11.1□□□□□ -0.63
SCARB2-226ENST00000640916 RNF186Q9NXI6 227 aa11.1□□□□□ -0.63
SCARB2-226ENST00000640916 KCNQ3O43525 872 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 TPTE2Q6XPS3 522 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 TTC5Q8N0Z6 440 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
SCARB2-226ENST00000640916 ABCC12Q96J65 1359 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 PRAMEF22A3QJZ6 481 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 TRPA1O75762 1119 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 HMOX1P09601 288 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 KIF23Q02241 960 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-226ENST00000640916 CXCL9Q07325 125 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 CTU1Q7Z7A3 348 aaKnown RBP11.08□□□□□ -0.64
SCARB2-226ENST00000640916 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
SCARB2-226ENST00000640916 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 SHTN1A0MZ66 631 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 GMPSP49915 693 aaPredicted RBP11.07□□□□□ -0.64
SCARB2-226ENST00000640916 HUNKP57058 714 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 RGMBQ6NW40 437 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 TRPM4Q8TD43 1214 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
SCARB2-226ENST00000640916 NIP7Q9Y221 180 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCARB2-226ENST00000640916 NUP98P52948 1817 aa11.07□□□□□ -0.64
SCARB2-226ENST00000640916 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
SCARB2-226ENST00000640916 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
SCARB2-226ENST00000640916 HOXA10P31260 410 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-226ENST00000640916 FXR1P51114 621 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCARB2-226ENST00000640916 HLFQ16534 295 aa11.06□□□□□ -0.64
SCARB2-226ENST00000640916 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
SCARB2-226ENST00000640916 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
SCARB2-226ENST00000640916 CSRNP1Q96S65 589 aa11.06□□□□□ -0.64
SCARB2-226ENST00000640916 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
SCARB2-226ENST00000640916 RGL2O15211 777 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 AOC3Q16853 763 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 RIC1Q4ADV7 1423 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 AMER1Q5JTC6 1135 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-226ENST00000640916 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 NIM1KQ8IY84 436 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
SCARB2-226ENST00000640916 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
SCARB2-226ENST00000640916 HTTP42858 3142 aa11.04□□□□□ -0.64
SCARB2-226ENST00000640916 PPIP5K2O43314 1243 aa11.04□□□□□ -0.64
SCARB2-226ENST00000640916 MORC1Q86VD1 984 aa11.04□□□□□ -0.64
SCARB2-226ENST00000640916 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
SCARB2-226ENST00000640916 PANK3Q9H999 370 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms