RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	NBPF26	B4DH59	902 aa		13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	NBPF14	Q5TI25	921 aa		13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	TSHZ3	Q63HK5	1081 aa		13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	NBPF10	Q6P3W6	841 aa	Known RBP	13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	NBPF15	Q8N660	670 aa		13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	PLBD2	Q8NHP8	589 aa		13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	USP42	Q9H9J4	1324 aa	Known RBP	13.81	□□□□□ -0.2
GFAP-238	ENST00000640859	PIP4K2A	P48426	406 aa	Predicted RBP	13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	NFKBIB	Q15653	356 aa		13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	NUTM1	Q86Y26	1132 aa		13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	HSCB	Q8IWL3	235 aa		13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	BICC1	Q9H694	974 aa	Known RBP	13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	COL15A1	P39059	1388 aa		13.8	□□□□□ -0.2
GFAP-238	ENST00000640859	NUP188	Q5SRE5	1749 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	ITGB4	P16144	1822 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	ERC2	O15083	957 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	PLSCR1	O15162	318 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	KCNQ2	O43526	872 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	RTL5	Q5HYW3	569 aa	Predicted RBP	13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	ERC1	Q8IUD2	1116 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	PI4K2B	Q8TCG2	481 aa		13.79	□□□□□ -0.2
GFAP-238	ENST00000640859	EP400	Q96L91	3159 aa		13.78	□□□□□ -0.2
GFAP-238	ENST00000640859	A1BG	P04217	495 aa		13.78	□□□□□ -0.2
GFAP-238	ENST00000640859	CHML	P26374	656 aa		13.78	□□□□□ -0.2
GFAP-238	ENST00000640859	PA2G4	Q9UQ80	394 aa	Known RBP	13.78	□□□□□ -0.2
GFAP-238	ENST00000640859	REC8	O95072	547 aa		13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	CASP7	P55210	303 aa		13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	EN1	Q05925	392 aa	Predicted RBP	13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	OS9	Q13438	667 aa	Predicted RBP	13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	EPHA10	Q5JZY3	1008 aa		13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	AK9	Q5TCS8	1911 aa		13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	ESYT1	Q9BSJ8	1104 aa		13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	SLK	Q9H2G2	1235 aa	Predicted RBP	13.77	□□□□□ -0.21
GFAP-238	ENST00000640859	TTC41P	Q6P2S7	1318 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	PTCD1	O75127	700 aa	Known RBP	13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	RABEP1	Q15276	862 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	SLC27A3	Q5K4L6	730 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	TTLL7	Q6ZT98	887 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	VSIG10	Q8N0Z9	540 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	PROM2	Q8N271	834 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	PIGB	Q92521	554 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	RBM42	Q9BTD8	480 aa	Known RBP	13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	KAT6B	Q8WYB5	2073 aa		13.76	□□□□□ -0.21
GFAP-238	ENST00000640859	TRIM6-TRIM34	B2RNG4	842 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859		H7C1W4	665 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	SASH1	O94885	1247 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	RFX5	P48382	616 aa	Predicted RBP	13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	RABL6	Q3YEC7	729 aa	Predicted RBP	13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	DEFB132	Q7Z7B7	95 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	CLASRP	Q8N2M8	674 aa	Known RBP	13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	RILPL2	Q969X0	211 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	ATG3	Q9NT62	314 aa		13.75	□□□□□ -0.21
GFAP-238	ENST00000640859	SPDYE2B	A6NHP3	402 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	ATP5J2-PTCD1	G3V325	749 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	SPDYE6	P0CI01	402 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	DDIT3	P35638	169 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	SPDYE2	Q495Y8	402 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	COPRS	Q9NQ92	184 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	CCNL1	Q9UK58	526 aa	Predicted RBP	13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	ASAP1	Q9ULH1	1129 aa		13.74	□□□□□ -0.21
GFAP-238	ENST00000640859	TJP1	Q07157	1748 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	PALLD	Q8WX93	1383 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	NHS	Q6T4R5	1651 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859		A0A087WZG4	1122 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	GLRX3	O76003	335 aa	Known RBP	13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	CD2BP2	O95400	341 aa	Known RBP	13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	TXNRD1	Q16881	649 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	JARID2	Q92833	1246 aa	Predicted RBP	13.73	□□□□□ -0.21
GFAP-238	ENST00000640859	CHMP5	Q9NZZ3	219 aa		13.73	□□□□□ -0.21
GFAP-238	ENST00000640859		K7ELQ4	463 aa	Predicted RBP	13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	EPB41L2	O43491	1005 aa	Known RBP	13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	FRAT2	O75474	233 aa	Predicted RBP	13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	EZH2	Q15910	746 aa	Known RBP	13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	UBE3B	Q7Z3V4	1068 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	DNAJC10	Q8IXB1	793 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	SPRYD3	Q8NCJ5	442 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	IL17RA	Q96F46	866 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	CAMKK2	Q96RR4	588 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	ECHDC1	Q9NTX5	307 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	DOT1L	Q8TEK3	1739 aa		13.72	□□□□□ -0.21
GFAP-238	ENST00000640859	IFIT2	P09913	472 aa	Known RBP	13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	FOXO4	P98177	505 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	PTPN12	Q05209	780 aa	Known RBP	13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	AACS	Q86V21	672 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	CNTROB	Q8N137	903 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	CCDC191	Q8NCU4	936 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	EAF2	Q96CJ1	260 aa	Predicted RBP	13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	ISCA1	Q9BUE6	129 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	CWC25	Q9NXE8	425 aa	Predicted RBP	13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	STK32B	Q9NY57	414 aa		13.71	□□□□□ -0.21
GFAP-238	ENST00000640859	LOC102724428	A0A0B4J2F2	783 aa		13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	MAP4K4	O95819	1239 aa	Predicted RBP	13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	ATP6V1A	P38606	617 aa		13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	SIK1	P57059	783 aa		13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	PTF1A	Q7RTS3	328 aa		13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	KLHDC4	Q8TBB5	520 aa		13.7	□□□□□ -0.22
GFAP-238	ENST00000640859	GPATCH3	Q96I76	525 aa		13.7	□□□□□ -0.22

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