RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 RGPD1P0DJD0 1748 aa16.83■□□□□ 0.28
GFAP-237ENST00000640552 RRAGDQ9NQL2 400 aaPredicted RBP16.83■□□□□ 0.28
GFAP-237ENST00000640552 LMBRD1Q9NUN5 540 aa16.83■□□□□ 0.28
GFAP-237ENST00000640552 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
GFAP-237ENST00000640552 RAD50Q92878 1312 aa16.82■□□□□ 0.28
GFAP-237ENST00000640552 PTMSP20962 102 aa16.82■□□□□ 0.28
GFAP-237ENST00000640552 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
GFAP-237ENST00000640552 ZSCAN23Q3MJ62 389 aa16.82■□□□□ 0.28
GFAP-237ENST00000640552 GOLIM4O00461 696 aa16.82■□□□□ 0.28
GFAP-237ENST00000640552 LSG1Q9H089 658 aaKnown RBP16.82■□□□□ 0.28
GFAP-237ENST00000640552 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 LARGE1O95461 756 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 HSP90AB3PQ58FF7 597 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 PRIM1P49642 420 aaKnown RBP16.81■□□□□ 0.28
GFAP-237ENST00000640552 KDM4AO75164 1064 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 PTMAP06454 111 aaKnown RBP16.81■□□□□ 0.28
GFAP-237ENST00000640552 FAM173BQ6P4H8 233 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
GFAP-237ENST00000640552 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
GFAP-237ENST00000640552 ANAPC15P60006 121 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 NCOA3Q9Y6Q9 1424 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
GFAP-237ENST00000640552 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
GFAP-237ENST00000640552 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 IL2RBP14784 551 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 GJB2P29033 226 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 COL9A3Q14050 684 aaPredicted RBP16.79■□□□□ 0.28
GFAP-237ENST00000640552 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
GFAP-237ENST00000640552 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 MEGF6O75095 1541 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 NFAT5O94916 1531 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
GFAP-237ENST00000640552 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 CEBPZQ03701 1054 aaKnown RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
GFAP-237ENST00000640552 CCDC171Q6TFL3 1326 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
GFAP-237ENST00000640552 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
GFAP-237ENST00000640552 TNNI3KQ59H18 835 aa16.77■□□□□ 0.28
GFAP-237ENST00000640552 USP48Q86UV5 1035 aa16.77■□□□□ 0.28
GFAP-237ENST00000640552 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
GFAP-237ENST00000640552 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.28
GFAP-237ENST00000640552 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
GFAP-237ENST00000640552 SYT1P21579 422 aa16.77■□□□□ 0.27
GFAP-237ENST00000640552 LARP1BQ659C4 914 aaKnown RBP16.77■□□□□ 0.27
GFAP-237ENST00000640552 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.27
GFAP-237ENST00000640552 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.27
GFAP-237ENST00000640552 KDM6AO15550 1401 aaPredicted RBP16.76■□□□□ 0.27
GFAP-237ENST00000640552 GOLGA6L4A6NEF3 574 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 STX6O43752 255 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
GFAP-237ENST00000640552 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 AOX1Q06278 1338 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 CHD2O14647 1828 aaKnown RBP16.76■□□□□ 0.27
GFAP-237ENST00000640552 FAM43AQ8N2R8 423 aa16.76■□□□□ 0.27
GFAP-237ENST00000640552 TFIP11Q9UBB9 837 aaKnown RBP16.76■□□□□ 0.27
GFAP-237ENST00000640552 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
GFAP-237ENST00000640552 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
GFAP-237ENST00000640552 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
GFAP-237ENST00000640552 HAND2P61296 217 aa16.75■□□□□ 0.27
GFAP-237ENST00000640552 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
GFAP-237ENST00000640552 MTX1Q13505 466 aa16.74■□□□□ 0.27
GFAP-237ENST00000640552 ACSBG1Q96GR2 724 aa16.74■□□□□ 0.27
GFAP-237ENST00000640552 BRD1O95696 1058 aa16.74■□□□□ 0.27
GFAP-237ENST00000640552 DNM1Q05193 864 aaKnown RBP16.74■□□□□ 0.27
GFAP-237ENST00000640552 SLC27A2O14975 620 aa16.74■□□□□ 0.27
GFAP-237ENST00000640552 CEP126Q9P2H0 1117 aa16.74■□□□□ 0.27
GFAP-237ENST00000640552 ME3Q16798 604 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
GFAP-237ENST00000640552 HIP1O00291 1037 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 PSMA5P28066 241 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
GFAP-237ENST00000640552 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
GFAP-237ENST00000640552 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
GFAP-237ENST00000640552 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
GFAP-237ENST00000640552 ESPNB1AK53 854 aa16.72■□□□□ 0.27
GFAP-237ENST00000640552 APPP05067 770 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms