RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
SCN8A-215ENST00000638820 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
SCN8A-215ENST00000638820 SIPA1L3O60292 1781 aaPredicted RBP16.27■□□□□ 0.19
SCN8A-215ENST00000638820 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.19
SCN8A-215ENST00000638820 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.19
SCN8A-215ENST00000638820 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.19
SCN8A-215ENST00000638820 SDSP20132 328 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 H7C1W4 665 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 MTX1Q13505 466 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
SCN8A-215ENST00000638820 C22orf23Q9BZE7 217 aa16.26■□□□□ 0.19
SCN8A-215ENST00000638820 RFC4P35249 363 aa16.25■□□□□ 0.19
SCN8A-215ENST00000638820 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
SCN8A-215ENST00000638820 RBM6P78332 1123 aaKnown RBP16.25■□□□□ 0.19
SCN8A-215ENST00000638820 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
SCN8A-215ENST00000638820 NLRP10Q86W26 655 aa16.25■□□□□ 0.19
SCN8A-215ENST00000638820 C5P01031 1676 aa16.25■□□□□ 0.19
SCN8A-215ENST00000638820 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
SCN8A-215ENST00000638820 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
SCN8A-215ENST00000638820 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
SCN8A-215ENST00000638820 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 RXRBP28702 533 aa16.24■□□□□ 0.19
SCN8A-215ENST00000638820 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
SCN8A-215ENST00000638820 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
SCN8A-215ENST00000638820 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
SCN8A-215ENST00000638820 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
SCN8A-215ENST00000638820 BECN1Q14457 450 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 LDHAL6AQ6ZMR3 332 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 UTYO14607 1347 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
SCN8A-215ENST00000638820 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
SCN8A-215ENST00000638820 GLRX3O76003 335 aaKnown RBP16.22■□□□□ 0.19
SCN8A-215ENST00000638820 TFCP2Q12800 502 aa16.22■□□□□ 0.19
SCN8A-215ENST00000638820 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
SCN8A-215ENST00000638820 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
SCN8A-215ENST00000638820 MPHOSPH8Q99549 860 aa16.22■□□□□ 0.19
SCN8A-215ENST00000638820 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
SCN8A-215ENST00000638820 HSP90AA1P07900 732 aaKnown RBP16.21■□□□□ 0.19
SCN8A-215ENST00000638820 PTPN12Q05209 780 aaKnown RBP16.21■□□□□ 0.19
SCN8A-215ENST00000638820 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
SCN8A-215ENST00000638820 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
SCN8A-215ENST00000638820 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
SCN8A-215ENST00000638820 ITGB4P16144 1822 aa16.21■□□□□ 0.19
SCN8A-215ENST00000638820 COL15A1P39059 1388 aa16.21■□□□□ 0.19
SCN8A-215ENST00000638820 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.18
SCN8A-215ENST00000638820 METTL24Q5JXM2 366 aa16.21■□□□□ 0.18
SCN8A-215ENST00000638820 TRAPPC3LQ5T215 181 aa16.21■□□□□ 0.18
SCN8A-215ENST00000638820 USPL1Q5W0Q7 1092 aa16.21■□□□□ 0.18
SCN8A-215ENST00000638820 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.18
SCN8A-215ENST00000638820 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 REC8O95072 547 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 PARP10Q53GL7 1025 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
SCN8A-215ENST00000638820 COPRSQ9NQ92 184 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 NRAPQ86VF7 1730 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 SASH1O94885 1247 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
SCN8A-215ENST00000638820 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
SCN8A-215ENST00000638820 APBA3O96018 575 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 ITGA6P23229 1130 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 KCNJ4P48050 445 aa16.2■□□□□ 0.18
SCN8A-215ENST00000638820 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
SCN8A-215ENST00000638820 IL15P40933 162 aaPredicted RBP16.19■□□□□ 0.18
SCN8A-215ENST00000638820 CCDC24Q8N4L8 307 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 PDE8AO60658 829 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 FOXO4P98177 505 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 SUSD4Q5VX71 490 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
SCN8A-215ENST00000638820 EYA2O00167 538 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 TIMM10P62072 90 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 LRRC24Q50LG9 513 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 RABL6Q3YEC7 729 aaPredicted RBP16.18■□□□□ 0.18
SCN8A-215ENST00000638820 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
SCN8A-215ENST00000638820 GREM2Q9H772 168 aa16.18■□□□□ 0.18
SCN8A-215ENST00000638820 CAMTA2O94983 1202 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 CTSWP56202 376 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 MCCP23508 829 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 TNNI3KQ59H18 835 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 CWC27Q6UX04 472 aaKnown RBP16.17■□□□□ 0.18
SCN8A-215ENST00000638820 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 FPGT-TNNI3KV9GXZ4 949 aa16.17■□□□□ 0.18
SCN8A-215ENST00000638820 IGHMBP2P38935 993 aaKnown RBP16.16■□□□□ 0.18
SCN8A-215ENST00000638820 CASP7P55210 303 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms