RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 LMBR1LQ6UX01 489 aa26.72■■□□□ 1.87
SCARB2-212ENST00000638663 SDSP20132 328 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 GPTP24298 496 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 HSP90AB3PQ58FF7 597 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 TBC1D9Q6ZT07 1266 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 NHSQ6T4R5 1651 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 ERVV-1B6SEH8 477 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 CDC45O75419 566 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 KCNQ4P56696 695 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 STAP2Q9UGK3 403 aa26.71■■□□□ 1.87
SCARB2-212ENST00000638663 MSH5O43196 834 aa26.7■■□□□ 1.86
SCARB2-212ENST00000638663 RFX5P48382 616 aaPredicted RBP26.7■■□□□ 1.86
SCARB2-212ENST00000638663 MYH14Q7Z406 1995 aaKnown RBP26.7■■□□□ 1.86
SCARB2-212ENST00000638663 RREB1Q92766 1687 aa26.7■■□□□ 1.86
SCARB2-212ENST00000638663 BTAF1O14981 1849 aa26.69■■□□□ 1.86
SCARB2-212ENST00000638663 CHMP3Q9Y3E7 222 aa26.69■■□□□ 1.86
SCARB2-212ENST00000638663 LINC00116Q8NCU8 138 aa26.69■■□□□ 1.86
SCARB2-212ENST00000638663 SASH1O94885 1247 aa26.68■■□□□ 1.86
SCARB2-212ENST00000638663 PCCAP05165 728 aaPredicted RBP26.68■■□□□ 1.86
SCARB2-212ENST00000638663 NLRP10Q86W26 655 aa26.68■■□□□ 1.86
SCARB2-212ENST00000638663 CLASRPQ8N2M8 674 aaKnown RBP26.68■■□□□ 1.86
SCARB2-212ENST00000638663 COPRSQ9NQ92 184 aa26.68■■□□□ 1.86
SCARB2-212ENST00000638663 ZNF831Q5JPB2 1677 aa26.68■■□□□ 1.86
SCARB2-212ENST00000638663 PTPN12Q05209 780 aaKnown RBP26.67■■□□□ 1.86
SCARB2-212ENST00000638663 FAM89AQ96GI7 184 aa26.67■■□□□ 1.86
SCARB2-212ENST00000638663 COL5A3P25940 1745 aaPredicted RBP26.67■■□□□ 1.86
SCARB2-212ENST00000638663 ZBTB38Q8NAP3 1195 aaPredicted RBP26.67■■□□□ 1.86
SCARB2-212ENST00000638663 TBC1D32Q96NH3 1257 aa26.67■■□□□ 1.86
SCARB2-212ENST00000638663 NUP98P52948 1817 aa26.66■■□□□ 1.86
SCARB2-212ENST00000638663 AOX1Q06278 1338 aa26.65■■□□□ 1.86
SCARB2-212ENST00000638663 ANKRD36CQ5JPF3 1778 aa26.65■■□□□ 1.86
SCARB2-212ENST00000638663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.65■■□□□ 1.86
SCARB2-212ENST00000638663 CAMTA2O94983 1202 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 AACSQ86V21 672 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 ZNF34Q8IZ26 560 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 SYNE4Q8N205 404 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 DDRGK1Q96HY6 314 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 SBF2Q86WG5 1849 aa26.63■■□□□ 1.85
SCARB2-212ENST00000638663 IFIT2P09913 472 aaKnown RBP26.62■■□□□ 1.85
SCARB2-212ENST00000638663 C22orf23Q9BZE7 217 aa26.62■■□□□ 1.85
SCARB2-212ENST00000638663 UBN2Q6ZU65 1347 aa26.62■■□□□ 1.85
SCARB2-212ENST00000638663 PI4K2BQ8TCG2 481 aa26.61■■□□□ 1.85
SCARB2-212ENST00000638663 TRMT112Q9UI30 125 aaKnown RBP26.61■■□□□ 1.85
SCARB2-212ENST00000638663 CCNL1Q9UK58 526 aaPredicted RBP26.61■■□□□ 1.85
SCARB2-212ENST00000638663 CNTNAP4Q9C0A0 1308 aa26.6■■□□□ 1.85
SCARB2-212ENST00000638663 TRIM6-TRIM34B2RNG4 842 aa26.6■■□□□ 1.85
SCARB2-212ENST00000638663 EAF2Q96CJ1 260 aaPredicted RBP26.6■■□□□ 1.85
SCARB2-212ENST00000638663 PLA2G12BQ9BX93 195 aa26.6■■□□□ 1.85
SCARB2-212ENST00000638663 CDHR2Q9BYE9 1310 aa26.6■■□□□ 1.85
SCARB2-212ENST00000638663 TUBGCP6Q96RT7 1819 aa26.59■■□□□ 1.85
SCARB2-212ENST00000638663 RILPL2Q969X0 211 aa26.59■■□□□ 1.85
SCARB2-212ENST00000638663 USP42Q9H9J4 1324 aaKnown RBP26.59■■□□□ 1.85
SCARB2-212ENST00000638663 CASC1Q6TDU7 716 aa26.59■■□□□ 1.85
SCARB2-212ENST00000638663 TTC41PQ6P2S7 1318 aa26.58■■□□□ 1.85
SCARB2-212ENST00000638663 TFCP2Q12800 502 aa26.57■■□□□ 1.84
SCARB2-212ENST00000638663 KRT27Q7Z3Y8 459 aa26.57■■□□□ 1.84
SCARB2-212ENST00000638663 BCL11BQ9C0K0 894 aaPredicted RBP26.57■■□□□ 1.84
SCARB2-212ENST00000638663 CCDC8Q9H0W5 538 aaPredicted RBP26.57■■□□□ 1.84
SCARB2-212ENST00000638663 ZNF594Q96JF6 807 aaPredicted RBP26.57■■□□□ 1.84
SCARB2-212ENST00000638663 CCDC85AQ96PX6 553 aaPredicted RBP26.57■■□□□ 1.84
SCARB2-212ENST00000638663 ECHDC1Q9NTX5 307 aa26.57■■□□□ 1.84
SCARB2-212ENST00000638663 IRS4O14654 1257 aaPredicted RBP26.56■■□□□ 1.84
SCARB2-212ENST00000638663 GPATCH3Q96I76 525 aa26.56■■□□□ 1.84
SCARB2-212ENST00000638663 MAP4K4O95819 1239 aaPredicted RBP26.55■■□□□ 1.84
SCARB2-212ENST00000638663 RC3H1Q5TC82 1133 aaKnown RBP26.55■■□□□ 1.84
SCARB2-212ENST00000638663 ZNF772Q68DY9 489 aaPredicted RBP26.55■■□□□ 1.84
SCARB2-212ENST00000638663 SMIM5Q71RC9 77 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 TLR7Q9NYK1 1049 aaKnown RBP26.55■■□□□ 1.84
SCARB2-212ENST00000638663 BRWD3Q6RI45 1802 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 ERC2O15083 957 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 CSF1RP07333 972 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 CCDC57Q2TAC2 916 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 SUSD4Q5VX71 490 aa26.55■■□□□ 1.84
SCARB2-212ENST00000638663 FAM177BA6PVY3 158 aa26.54■■□□□ 1.84
SCARB2-212ENST00000638663 GLRX3O76003 335 aaKnown RBP26.54■■□□□ 1.84
SCARB2-212ENST00000638663 FAM196AQ6ZSG2 479 aa26.54■■□□□ 1.84
SCARB2-212ENST00000638663 ATG9AQ7Z3C6 839 aa26.54■■□□□ 1.84
SCARB2-212ENST00000638663 LY75O60449 1722 aa26.54■■□□□ 1.84
SCARB2-212ENST00000638663 NIP7Q9Y221 180 aaKnown RBP eCLIP26.53■■□□□ 1.84
SCARB2-212ENST00000638663 GNPATO15228 680 aa26.53■■□□□ 1.84
SCARB2-212ENST00000638663 TNNI3KQ59H18 835 aa26.53■■□□□ 1.84
SCARB2-212ENST00000638663 ZNF652Q9Y2D9 606 aa26.53■■□□□ 1.84
SCARB2-212ENST00000638663 FPGT-TNNI3KV9GXZ4 949 aa26.53■■□□□ 1.84
SCARB2-212ENST00000638663 EYA2O00167 538 aa26.52■■□□□ 1.84
SCARB2-212ENST00000638663 EIF5BO60841 1220 aaKnown RBP26.52■■□□□ 1.84
SCARB2-212ENST00000638663 RPS6KA4O75676 772 aa26.52■■□□□ 1.84
SCARB2-212ENST00000638663 CTSWP56202 376 aa26.52■■□□□ 1.84
SCARB2-212ENST00000638663 RBM6P78332 1123 aaKnown RBP26.52■■□□□ 1.84
SCARB2-212ENST00000638663 LRRC24Q50LG9 513 aa26.52■■□□□ 1.84
SCARB2-212ENST00000638663 PARP10Q53GL7 1025 aa26.52■■□□□ 1.84
SCARB2-212ENST00000638663 TTLL11Q8NHH1 800 aa26.51■■□□□ 1.83
SCARB2-212ENST00000638663 UTP14AQ9BVJ6 771 aaKnown RBP26.51■■□□□ 1.83
SCARB2-212ENST00000638663 IL15P40933 162 aaPredicted RBP26.51■■□□□ 1.83
SCARB2-212ENST00000638663 RBM25P49756 843 aaKnown RBP26.51■■□□□ 1.83
SCARB2-212ENST00000638663 IFIT5Q13325 482 aaKnown RBP26.51■■□□□ 1.83
SCARB2-212ENST00000638663 PUS3Q9BZE2 481 aaKnown RBP26.51■■□□□ 1.83
SCARB2-212ENST00000638663 BCORQ6W2J9 1755 aa26.5■■□□□ 1.83
SCARB2-212ENST00000638663 SH3TC1Q8TE82 1336 aa26.5■■□□□ 1.83
SCARB2-212ENST00000638663 PDE8AO60658 829 aa26.5■■□□□ 1.83
SCARB2-212ENST00000638663 CIAO1O76071 339 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms