RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 ANAPC15P60006 121 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 HDGFL1Q5TGJ6 251 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
GFAP-228ENST00000638488 OTUD7AQ8TE49 926 aaPredicted RBP14.34□□□□□ -0.11
GFAP-228ENST00000638488 ST7Q9NRC1 585 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 ATP10DQ9P241 1426 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 NFAT5O94916 1531 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 CCDC186Q7Z3E2 898 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 IL17RAQ96F46 866 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 ZNF446Q9NWS9 450 aa14.34□□□□□ -0.11
GFAP-228ENST00000638488 H2AFXP16104 143 aaPredicted RBP14.33□□□□□ -0.11
GFAP-228ENST00000638488 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.11
GFAP-228ENST00000638488 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.11
GFAP-228ENST00000638488 ICE2Q659A1 982 aa14.33□□□□□ -0.11
GFAP-228ENST00000638488 ANKRD24Q8TF21 1146 aa14.33□□□□□ -0.11
GFAP-228ENST00000638488 PHAXQ9H814 394 aaKnown RBP14.33□□□□□ -0.11
GFAP-228ENST00000638488 KCNQ3O43525 872 aa14.33□□□□□ -0.12
GFAP-228ENST00000638488 CASQ1P31415 396 aa14.33□□□□□ -0.12
GFAP-228ENST00000638488 TEFQ10587 303 aa14.33□□□□□ -0.12
GFAP-228ENST00000638488 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.12
GFAP-228ENST00000638488 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
GFAP-228ENST00000638488 TPM4P67936 248 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 ELF2Q15723 593 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 AXIN2Q9Y2T1 843 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 SLU7O95391 586 aaKnown RBP14.32□□□□□ -0.12
GFAP-228ENST00000638488 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 USP54Q70EL1 1684 aa14.32□□□□□ -0.12
GFAP-228ENST00000638488 MCCP23508 829 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 LRMPQ12912 555 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 NYAP1Q6ZVC0 841 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 HOMEZQ8IX15 550 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 MYCBPQ99417 103 aaPredicted RBP14.31□□□□□ -0.12
GFAP-228ENST00000638488 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
GFAP-228ENST00000638488 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 FHOD1Q9Y613 1164 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 ERBB3P21860 1342 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 NEMFO60524 1076 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 ANXA1P04083 346 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 ATF3P18847 181 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 NCAPGQ9BPX3 1015 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 C19orf44Q9H6X5 657 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
GFAP-228ENST00000638488 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
GFAP-228ENST00000638488 GNAI2P04899 355 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
GFAP-228ENST00000638488 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 PLA2G4DQ86XP0 818 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 MYO1CO00159 1063 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 HSPA2P54652 639 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 LRRC37A3O60309 1634 aa14.3□□□□□ -0.12
GFAP-228ENST00000638488 HMMRO75330 724 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
GFAP-228ENST00000638488 CDC25BP30305 580 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 GPS2Q13227 327 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 PTPN14Q15678 1187 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 SYT10Q6XYQ8 523 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.12
GFAP-228ENST00000638488 ZNF75DP51815 510 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 KCND1Q9NSA2 647 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 V9GYY5 206 aaPredicted RBP14.29□□□□□ -0.12
GFAP-228ENST00000638488 C1orf167Q5SNV9 1468 aa14.29□□□□□ -0.12
GFAP-228ENST00000638488 PNMA6AP0CW24 399 aaPredicted RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 DRC7Q8IY82 874 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 GOLGA6L1Q8N7Z2 621 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 ELP1O95163 1332 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 PLA2G4AP47712 749 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
GFAP-228ENST00000638488 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
GFAP-228ENST00000638488 TMEM94Q12767 1356 aa14.27□□□□□ -0.12
GFAP-228ENST00000638488 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.12
GFAP-228ENST00000638488 PNMA6EA0A0J9YXQ4 647 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 ATP8B1O43520 1251 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 NEK11Q8NG66 645 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 CACTINQ8WUQ7 758 aaKnown RBP14.27□□□□□ -0.13
GFAP-228ENST00000638488 NLRP2Q9NX02 1062 aa14.27□□□□□ -0.13
GFAP-228ENST00000638488 PXDNQ92626 1479 aa14.26□□□□□ -0.13
GFAP-228ENST00000638488 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
GFAP-228ENST00000638488 GNAI3P08754 354 aa14.26□□□□□ -0.13
GFAP-228ENST00000638488 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
GFAP-228ENST00000638488 L2HGDHQ9H9P8 463 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms