RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
SMARCA2-265ENST00000638139 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
SMARCA2-265ENST00000638139 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
SMARCA2-265ENST00000638139 SASH1O94885 1247 aa12□□□□□ -0.49
SMARCA2-265ENST00000638139 KCNJ4P48050 445 aa12□□□□□ -0.49
SMARCA2-265ENST00000638139 LARP1BQ659C4 914 aaKnown RBP12□□□□□ -0.49
SMARCA2-265ENST00000638139 TTC6Q86TZ1 520 aa12□□□□□ -0.49
SMARCA2-265ENST00000638139 THEMISQ8N1K5 641 aaPredicted RBP12□□□□□ -0.49
SMARCA2-265ENST00000638139 SLC27A2O14975 620 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 SUCLG2Q96I99 432 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 PRAMEF22A3QJZ6 481 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 HIP1O00291 1037 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 KCNF1Q9H3M0 494 aa11.99□□□□□ -0.49
SMARCA2-265ENST00000638139 CCDC192P0DO97 292 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 HMGN5P82970 282 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 FAM173BQ6P4H8 233 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 TSC1Q92574 1164 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 SNRKQ9NRH2 765 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 HDAC5Q9UQL6 1122 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 PXDNQ92626 1479 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 LIG1P18858 919 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 PSMA5P28066 241 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 KRT85P78386 507 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 ARID3AQ99856 593 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 BICC1Q9H694 974 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 HEG1Q9ULI3 1381 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 NPHP4O75161 1426 aaPredicted RBP11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 ADGRL3Q9HAR2 1447 aa11.98□□□□□ -0.49
SMARCA2-265ENST00000638139 GRM8O00222 908 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 KIAA1524Q8TCG1 905 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 TCEANC2Q96MN5 208 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 PYCARDQ9ULZ3 195 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 TAF6LQ9Y6J9 622 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 UTYO14607 1347 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 ELP1O95163 1332 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 SPC24Q8NBT2 197 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 NUP62CLQ9H1M0 184 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-265ENST00000638139 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 MRVI1Q9Y6F6 885 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 MED23Q9ULK4 1368 aa11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-265ENST00000638139 TPM3P06753 285 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 PDCP20941 246 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 RPS6KB1P23443 525 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 TOB2Q14106 344 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 CAMK4Q16566 473 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 FAM200AQ8TCP9 573 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 FSD1Q9BTV5 496 aa11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-265ENST00000638139 TYRO3Q06418 890 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 ANKRD1Q15327 319 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 SIL1Q9H173 461 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 TFIP11Q9UBB9 837 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 JCADQ9P266 1359 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
SMARCA2-265ENST00000638139 AIMP1Q12904 312 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 GOLGA6L6A8MZA4 724 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 PSME1Q06323 249 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 LUZP1Q86V48 1076 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 CCDC94Q9BW85 323 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 DACT1Q9NYF0 836 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 IGKV5-2P06315 115 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 STK3Q13188 491 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms