RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 SSFA2P28290 1259 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 NKX1-1Q15270 411 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-225ENST00000638099 HSP90AB4PQ58FF6 505 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 ECHDC1Q9NTX5 307 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 UTYO14607 1347 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
GABRB3-225ENST00000638099 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
GABRB3-225ENST00000638099 GSE1Q14687 1217 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
GABRB3-225ENST00000638099 ABCC6O95255 1503 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 FAM227BQ96M60 508 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 FAM177BA6PVY3 158 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 EXOC5O00471 708 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
GABRB3-225ENST00000638099 KCNQ4P56696 695 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 PTH1RQ03431 593 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 HLFQ16534 295 aa9.6□□□□□ -0.87
GABRB3-225ENST00000638099 GLRX3O76003 335 aaKnown RBP9.59□□□□□ -0.87
GABRB3-225ENST00000638099 MCM4P33991 863 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 DDIT3P35638 169 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 CASP7P55210 303 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 COL9A3Q14050 684 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-225ENST00000638099 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 LRRC24Q50LG9 513 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 NEUROD6Q96NK8 337 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 PUS3Q9BZE2 481 aaKnown RBP9.59□□□□□ -0.87
GABRB3-225ENST00000638099 CWC25Q9NXE8 425 aaPredicted RBP9.59□□□□□ -0.87
GABRB3-225ENST00000638099 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
GABRB3-225ENST00000638099 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
GABRB3-225ENST00000638099 SGSM2O43147 1006 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 TIMM10P62072 90 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 FOXO4P98177 505 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 ERC1Q8IUD2 1116 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 DNAJC2Q99543 621 aaKnown RBP9.58□□□□□ -0.88
GABRB3-225ENST00000638099 ZBTB1Q9Y2K1 713 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
GABRB3-225ENST00000638099 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
GABRB3-225ENST00000638099 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 ITGB4P16144 1822 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 ST18O60284 1047 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 NMIQ13287 307 aaPredicted RBP9.58□□□□□ -0.88
GABRB3-225ENST00000638099 FSD1Q9BTV5 496 aa9.58□□□□□ -0.88
GABRB3-225ENST00000638099 LAMB4A4D0S4 1761 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 UBR2Q8IWV8 1755 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 AOX1Q06278 1338 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 TTC41PQ6P2S7 1318 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
GABRB3-225ENST00000638099 A0A0D9SFI3 127 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 H7C1W4 665 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 TNNI3KQ59H18 835 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 FAM182BQ5T319 152 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 GPATCH3Q96I76 525 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 LSG1Q9H089 658 aaKnown RBP9.57□□□□□ -0.88
GABRB3-225ENST00000638099 HDAC5Q9UQL6 1122 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 FPGT-TNNI3KV9GXZ4 949 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 KCNQ2O43526 872 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 MCCP23508 829 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
GABRB3-225ENST00000638099 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
GABRB3-225ENST00000638099 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
GABRB3-225ENST00000638099 EP400Q96L91 3159 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 ADCK5Q3MIX3 580 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 RABL6Q3YEC7 729 aaPredicted RBP9.56□□□□□ -0.88
GABRB3-225ENST00000638099 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 KIAA1211Q6ZU35 1233 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 TMX3Q96JJ7 454 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 TCEANC2Q96MN5 208 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 SEC62Q99442 399 aaKnown RBP9.56□□□□□ -0.88
GABRB3-225ENST00000638099 TAF6LQ9Y6J9 622 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 DDB1Q16531 1140 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 SNX14Q9Y5W7 946 aa9.56□□□□□ -0.88
GABRB3-225ENST00000638099 HSPA4P34932 840 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 ATG9AQ7Z3C6 839 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 ZNF589Q86UQ0 364 aaPredicted RBP9.55□□□□□ -0.88
GABRB3-225ENST00000638099 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
GABRB3-225ENST00000638099 C8orf37Q96NL8 207 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 RAD50Q92878 1312 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
GABRB3-225ENST00000638099 STARD3NLO95772 234 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 CYP19A1P11511 503 aaPredicted RBP9.55□□□□□ -0.88
GABRB3-225ENST00000638099 TCIRG1Q13488 830 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 FAM98CQ17RN3 349 aaKnown RBP9.55□□□□□ -0.88
GABRB3-225ENST00000638099 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 EVI5LQ96CN4 794 aa9.55□□□□□ -0.88
GABRB3-225ENST00000638099 TRAK2O60296 914 aa9.54□□□□□ -0.88
GABRB3-225ENST00000638099 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
GABRB3-225ENST00000638099 KCNJ4P48050 445 aa9.54□□□□□ -0.88
GABRB3-225ENST00000638099 CCDC191Q8NCU4 936 aa9.54□□□□□ -0.88
GABRB3-225ENST00000638099 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
GABRB3-225ENST00000638099 NUP188Q5SRE5 1749 aa9.54□□□□□ -0.88
GABRB3-225ENST00000638099 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms