RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 IPO4Q8TEX9 1081 aaKnown RBP7.52□□□□□ -1.21
SCN2A-216ENST00000637367 FAM107BQ9H098 131 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 CALCOCO1Q9P1Z2 691 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
SCN2A-216ENST00000637367 IFIT5Q13325 482 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 Q6ZUG5 572 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 SLC26A6Q9BXS9 759 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC113Q9H0I3 377 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 LUC7LQ9NQ29 371 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 NEMFO60524 1076 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 GADD45BO75293 160 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 CHMLP26374 656 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 ATP8B2P98198 1209 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 PKP1Q13835 747 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 WASF1Q92558 559 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 PHACTR2O75167 634 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 HMGB1P09429 215 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 SYKP43405 635 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 AFMP43652 599 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 NMIQ13287 307 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 EIF4A2Q14240 407 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 TDRD12Q587J7 1177 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 GAS2L3Q86XJ1 694 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 POLR3AO14802 1390 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 U2AF2P26368 475 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 RBM25P49756 843 aaKnown RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 SPA17Q15506 151 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 TMEM67Q5HYA8 995 aa7.51□□□□□ -1.21
SCN2A-216ENST00000637367 IQSEC3Q9UPP2 1182 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-216ENST00000637367 IDEP14735 1019 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 ANAPC15P60006 121 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC102BQ68D86 513 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 LDHAL6AQ6ZMR3 332 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 TRMT1LQ7Z2T5 733 aaKnown RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 KLHL34Q8N239 644 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 GBP3Q9H0R5 595 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 PHAXQ9H814 394 aaKnown RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 BCCIPQ9P287 314 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 ANKRD36BQ8N2N9 1353 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 ERLIN2O94905 339 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 RXRAP19793 462 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 CACNA2D4Q7Z3S7 1137 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 TAF4BQ92750 862 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 DRC1Q96MC2 740 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 SRRTQ9BXP5 876 aaKnown RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 UBA5Q9GZZ9 404 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 HYPKQ9NX55 129 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 PHF8Q9UPP1 1060 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 PAXBP1Q9Y5B6 917 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 SBNO2Q9Y2G9 1366 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 FAM135AQ9P2D6 1515 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 ANKRD62A6NC57 917 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 N4BP3O15049 544 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 METAP2P50579 478 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 SYT10Q6XYQ8 523 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 COPS6Q7L5N1 327 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 BMP2KQ9NSY1 1161 aaPredicted RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 TRMT112Q9UI30 125 aaKnown RBP7.5□□□□□ -1.21
SCN2A-216ENST00000637367 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
SCN2A-216ENST00000637367 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 KARSQ15046 597 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 CTCFLQ8NI51 663 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 XAGE3Q8WTP9 111 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 MRPS27Q92552 414 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 AKAP2Q9Y2D5 859 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 ADGRL1O94910 1474 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NSD2O96028 1365 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NPHP3Q7Z494 1330 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 STX17P56962 302 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 SSRP1Q08945 709 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 HLTFQ14527 1009 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 CHRNA2Q15822 529 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 RNF187Q5TA31 235 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 LMBR1LQ6UX01 489 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 ZSCAN29Q8IWY8 852 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 IFNKQ9P0W0 207 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 A0A1B0GVL5 298 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 MYO1BO43795 1136 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 SLU7O95391 586 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 MTIF2P46199 727 aaKnown RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 NLRP5P59047 1200 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 MAP3K12Q12852 859 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 CREB3L3Q68CJ9 461 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 IQCEQ6IPM2 695 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 ALG1Q9BT22 464 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC94Q9BW85 323 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-216ENST00000637367 ZSCAN16Q9H4T2 348 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms