RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
PCCA-213ENST00000636475 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
PCCA-213ENST00000636475 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
PCCA-213ENST00000636475 ZNF445P59923 1031 aa12.04□□□□□ -0.48
PCCA-213ENST00000636475 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
PCCA-213ENST00000636475 MBD3O95983 291 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 LIMCH1Q9UPQ0 1083 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
PCCA-213ENST00000636475 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
PCCA-213ENST00000636475 KCPQ6ZWJ8 1503 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 NHSL1Q5SYE7 1610 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 IL2RBP14784 551 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
PCCA-213ENST00000636475 VPS53Q5VIR6 699 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
PCCA-213ENST00000636475 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
PCCA-213ENST00000636475 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
PCCA-213ENST00000636475 SLAIN2Q9P270 581 aa12.02□□□□□ -0.49
PCCA-213ENST00000636475 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
PCCA-213ENST00000636475 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 PRPF40AO75400 957 aaKnown RBP12.01□□□□□ -0.49
PCCA-213ENST00000636475 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
PCCA-213ENST00000636475 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
PCCA-213ENST00000636475 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
PCCA-213ENST00000636475 TJP1Q07157 1748 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 A0A087WZG4 1122 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 ATP5JP18859 108 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 PSMA5P28066 241 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 AK2P54819 239 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 CASP7P55210 303 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
PCCA-213ENST00000636475 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 UBE3BQ7Z3V4 1068 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 GAS2L3Q86XJ1 694 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 ARXQ96QS3 562 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 SIL1Q9H173 461 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 CYP46A1Q9Y6A2 500 aa12.01□□□□□ -0.49
PCCA-213ENST00000636475 JCADQ9P266 1359 aa12□□□□□ -0.49
PCCA-213ENST00000636475 MED23Q9ULK4 1368 aa12□□□□□ -0.49
PCCA-213ENST00000636475 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
PCCA-213ENST00000636475 TNNI3KQ59H18 835 aa12□□□□□ -0.49
PCCA-213ENST00000636475 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
PCCA-213ENST00000636475 PANK2Q9BZ23 570 aa12□□□□□ -0.49
PCCA-213ENST00000636475 HMG20BQ9P0W2 317 aa12□□□□□ -0.49
PCCA-213ENST00000636475 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
PCCA-213ENST00000636475 H7C1W4 665 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 PTH1RQ03431 593 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 PRPF40BQ6NWY9 871 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 CAVIN1Q6NZI2 390 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 ANP32BQ92688 251 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 PDRG1Q9NUG6 133 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 CWC25Q9NXE8 425 aaPredicted RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 RGS17Q9UGC6 210 aaPredicted RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 RUFY3Q7L099 469 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 CCDC191Q8NCU4 936 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 JAKMIP1Q96N16 626 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 TLR7Q9NYK1 1049 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 ATP6V1DQ9Y5K8 247 aa11.99□□□□□ -0.49
PCCA-213ENST00000636475 RBM8AQ9Y5S9 174 aaKnown RBP11.99□□□□□ -0.49
PCCA-213ENST00000636475 SPEF2Q9C093 1822 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 NBPF26B4DH59 902 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 KCNJ4P48050 445 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 ANKRD1Q15327 319 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 NBPF14Q5TI25 921 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 NBPF15Q8N660 670 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 KLHDC4Q8TBB5 520 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 SYAP1Q96A49 352 aaPredicted RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 PTCD1O75127 700 aaKnown RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 NASPP49321 788 aaPredicted RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 CCDC173Q0VFZ6 552 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 TFCP2Q12800 502 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 TMEM87AQ8NBN3 555 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 FAM227BQ96M60 508 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
PCCA-213ENST00000636475 SMC3Q9UQE7 1217 aa11.98□□□□□ -0.49
PCCA-213ENST00000636475 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms