RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CIAPIN1Q6FI81 312 aa24.55■■□□□ 1.52
CLN6-212ENST00000636020 LARGE2Q8N3Y3 721 aa24.55■■□□□ 1.52
CLN6-212ENST00000636020 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
CLN6-212ENST00000636020 ADARB2Q9NS39 739 aaKnown RBP24.54■■□□□ 1.52
CLN6-212ENST00000636020 PRAMEF22A3QJZ6 481 aa24.53■■□□□ 1.52
CLN6-212ENST00000636020 GAS2L2Q8NHY3 880 aa24.53■■□□□ 1.52
CLN6-212ENST00000636020 CEMIPQ8WUJ3 1361 aa24.53■■□□□ 1.52
CLN6-212ENST00000636020 BTBD11A6QL63 1104 aa24.52■■□□□ 1.52
CLN6-212ENST00000636020 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
CLN6-212ENST00000636020 GPRC5DQ9NZD1 345 aa24.52■■□□□ 1.52
CLN6-212ENST00000636020 GTF2E1P29083 439 aaPredicted RBP24.51■■□□□ 1.51
CLN6-212ENST00000636020 GLIS2Q9BZE0 524 aaPredicted RBP24.51■■□□□ 1.51
CLN6-212ENST00000636020 PGAP2Q9UHJ9 254 aa24.51■■□□□ 1.51
CLN6-212ENST00000636020 NBPF26B4DH59 902 aa24.5■■□□□ 1.51
CLN6-212ENST00000636020 HLFQ16534 295 aa24.5■■□□□ 1.51
CLN6-212ENST00000636020 NBPF10Q6P3W6 841 aaKnown RBP24.5■■□□□ 1.51
CLN6-212ENST00000636020 NBPF15Q8N660 670 aa24.5■■□□□ 1.51
CLN6-212ENST00000636020 ZIC5Q96T25 663 aa24.5■■□□□ 1.51
CLN6-212ENST00000636020 HOXA10P31260 410 aaPredicted RBP24.49■■□□□ 1.51
CLN6-212ENST00000636020 SOX10P56693 466 aa24.49■■□□□ 1.51
CLN6-212ENST00000636020 PRPF38BQ5VTL8 546 aaKnown RBP24.49■■□□□ 1.51
CLN6-212ENST00000636020 NIM1KQ8IY84 436 aa24.49■■□□□ 1.51
CLN6-212ENST00000636020 TIMELESSQ9UNS1 1208 aa24.49■■□□□ 1.51
CLN6-212ENST00000636020 SNRPA1P09661 255 aaKnown RBP24.48■■□□□ 1.51
CLN6-212ENST00000636020 HSPA5P11021 654 aaKnown RBP24.48■■□□□ 1.51
CLN6-212ENST00000636020 NOGQ13253 232 aa24.48■■□□□ 1.51
CLN6-212ENST00000636020 ABCC12Q96J65 1359 aa24.48■■□□□ 1.51
CLN6-212ENST00000636020 EIF4G2P78344 907 aaKnown RBP eCLIP24.47■■□□□ 1.51
CLN6-212ENST00000636020 SLC51AQ86UW1 340 aa24.47■■□□□ 1.51
CLN6-212ENST00000636020 NUTM1Q86Y26 1132 aa24.46■■□□□ 1.51
CLN6-212ENST00000636020 ZNF408Q9H9D4 720 aa24.46■■□□□ 1.51
CLN6-212ENST00000636020 NPC1L1Q9UHC9 1359 aa24.45■■□□□ 1.5
CLN6-212ENST00000636020 CXCL9Q07325 125 aa24.45■■□□□ 1.5
CLN6-212ENST00000636020 ZC3H15Q8WU90 426 aaKnown RBP24.45■■□□□ 1.5
CLN6-212ENST00000636020 RPGRQ92834 1020 aaKnown RBP24.45■■□□□ 1.5
CLN6-212ENST00000636020 NYXQ9GZU5 481 aa24.45■■□□□ 1.5
CLN6-212ENST00000636020 KIF7Q2M1P5 1343 aa24.44■■□□□ 1.5
CLN6-212ENST00000636020 PPIP5K2O43314 1243 aa24.44■■□□□ 1.5
CLN6-212ENST00000636020 GMPSP49915 693 aaPredicted RBP24.43■■□□□ 1.5
CLN6-212ENST00000636020 HIRAP54198 1017 aaPredicted RBP24.43■■□□□ 1.5
CLN6-212ENST00000636020 CDC37L1Q7L3B6 337 aa24.43■■□□□ 1.5
CLN6-212ENST00000636020 CRAMP1Q96RY5 1269 aa24.43■■□□□ 1.5
CLN6-212ENST00000636020 VPS33BQ9H267 617 aa24.43■■□□□ 1.5
CLN6-212ENST00000636020 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
CLN6-212ENST00000636020 U2SURPO15042 1029 aaKnown RBP24.42■■□□□ 1.5
CLN6-212ENST00000636020 AOC3Q16853 763 aa24.42■■□□□ 1.5
CLN6-212ENST00000636020 RIC1Q4ADV7 1423 aa24.42■■□□□ 1.5
CLN6-212ENST00000636020 TCERG1O14776 1098 aaKnown RBP24.41■■□□□ 1.5
CLN6-212ENST00000636020 HUNKP57058 714 aa24.41■■□□□ 1.5
CLN6-212ENST00000636020 ZNRF3Q9ULT6 936 aa24.41■■□□□ 1.5
CLN6-212ENST00000636020 RBM17Q96I25 401 aaKnown RBP24.4■■□□□ 1.5
CLN6-212ENST00000636020 SAGE1Q9NXZ1 904 aa24.4■■□□□ 1.5
CLN6-212ENST00000636020 COL3A1P02461 1466 aaPredicted RBP24.39■■□□□ 1.5
CLN6-212ENST00000636020 FAM155AB1AL88 458 aaPredicted RBP24.39■■□□□ 1.49
CLN6-212ENST00000636020 PHACTR3Q96KR7 559 aa24.39■■□□□ 1.49
CLN6-212ENST00000636020 CDHR2Q9BYE9 1310 aa24.38■■□□□ 1.49
CLN6-212ENST00000636020 TRPM4Q8TD43 1214 aa24.38■■□□□ 1.49
CLN6-212ENST00000636020 ERVV-1B6SEH8 477 aa24.37■■□□□ 1.49
CLN6-212ENST00000636020 USP48Q86UV5 1035 aa24.36■■□□□ 1.49
CLN6-212ENST00000636020 RTFDC1Q9BY42 306 aaPredicted RBP24.36■■□□□ 1.49
CLN6-212ENST00000636020 ATP6V0A2Q9Y487 856 aa24.36■■□□□ 1.49
CLN6-212ENST00000636020 IBTKQ9P2D0 1353 aaPredicted RBP24.35■■□□□ 1.49
CLN6-212ENST00000636020 KIF23Q02241 960 aaPredicted RBP24.35■■□□□ 1.49
CLN6-212ENST00000636020 RGMBQ6NW40 437 aa24.35■■□□□ 1.49
CLN6-212ENST00000636020 C3orf67Q6ZVT6 689 aa24.35■■□□□ 1.49
CLN6-212ENST00000636020 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
CLN6-212ENST00000636020 RNF186Q9NXI6 227 aa24.35■■□□□ 1.49
CLN6-212ENST00000636020 TRPA1O75762 1119 aa24.34■■□□□ 1.49
CLN6-212ENST00000636020 SUSD4Q5VX71 490 aa24.34■■□□□ 1.49
CLN6-212ENST00000636020 DLK2Q6UY11 383 aa24.34■■□□□ 1.49
CLN6-212ENST00000636020 SUPT20HQ8NEM7 779 aa24.34■■□□□ 1.49
CLN6-212ENST00000636020 UBN2Q6ZU65 1347 aa24.34■■□□□ 1.49
CLN6-212ENST00000636020 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.49
CLN6-212ENST00000636020 CCDC102AQ96A19 550 aa24.33■■□□□ 1.49
CLN6-212ENST00000636020 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
CLN6-212ENST00000636020 CNOT7Q9UIV1 285 aaKnown RBP24.33■■□□□ 1.49
CLN6-212ENST00000636020 NUP98P52948 1817 aa24.33■■□□□ 1.48
CLN6-212ENST00000636020 MAP3K15Q6ZN16 1313 aa24.33■■□□□ 1.48
CLN6-212ENST00000636020 SHTN1A0MZ66 631 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 PER1O15534 1290 aaPredicted RBP24.32■■□□□ 1.48
CLN6-212ENST00000636020 RAD17O75943 681 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 GPTP24298 496 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 PRKAR2BP31323 418 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 TNIP1Q15025 636 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 MCM10Q7L590 875 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 CTU1Q7Z7A3 348 aaKnown RBP24.32■■□□□ 1.48
CLN6-212ENST00000636020 NGEFQ8N5V2 710 aa24.32■■□□□ 1.48
CLN6-212ENST00000636020 H7C1D1 291 aa24.3■■□□□ 1.48
CLN6-212ENST00000636020 NTSR2O95665 410 aa24.3■■□□□ 1.48
CLN6-212ENST00000636020 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
CLN6-212ENST00000636020 TTLL7Q6ZT98 887 aa24.3■■□□□ 1.48
CLN6-212ENST00000636020 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
CLN6-212ENST00000636020 GBA2Q9HCG7 927 aaPredicted RBP24.3■■□□□ 1.48
CLN6-212ENST00000636020 ZNF34Q8IZ26 560 aa24.29■■□□□ 1.48
CLN6-212ENST00000636020 C2orf69Q8N8R5 385 aa24.29■■□□□ 1.48
CLN6-212ENST00000636020 RTF1Q92541 710 aaKnown RBP24.29■■□□□ 1.48
CLN6-212ENST00000636020 ZNF157P51786 506 aaPredicted RBP24.28■■□□□ 1.48
CLN6-212ENST00000636020 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
CLN6-212ENST00000636020 NLRP3Q96P20 1036 aa24.28■■□□□ 1.48
CLN6-212ENST00000636020 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms